RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 SDCBP2Q9H190 292 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 ANXA4P09525 319 aaPredicted RBP20.85■□□□□ 0.93
RNF40-201ENST00000324685 ITGB5P18084 799 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 ALDH4A1P30038 563 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 DNASE1L1P49184 302 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 LIN52Q52LA3 116 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 ZNF433Q8N7K0 673 aaPredicted RBP20.85■□□□□ 0.93
RNF40-201ENST00000324685 C12orf50Q8NA57 414 aaPredicted RBP20.85■□□□□ 0.93
RNF40-201ENST00000324685 PURBQ96QR8 312 aaKnown RBP20.85■□□□□ 0.93
RNF40-201ENST00000324685 CPXM1Q96SM3 734 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 TBC1D14Q9P2M4 693 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 MSI1O43347 362 aaKnown RBP20.85■□□□□ 0.93
RNF40-201ENST00000324685 CD247P20963 164 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 S100A1P23297 94 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 SP100P23497 879 aaPredicted RBP20.85■□□□□ 0.93
RNF40-201ENST00000324685 CDKN2BP42772 138 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 GALK1P51570 392 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 AKR1D1P51857 326 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 YBEYP58557 167 aaPredicted RBP20.85■□□□□ 0.93
RNF40-201ENST00000324685 ARSHQ5FYA8 562 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 FATE1Q969F0 183 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 PRRG4Q9BZD6 226 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 TRNAU1APQ9NX07 287 aaKnown RBP20.85■□□□□ 0.93
RNF40-201ENST00000324685 CNOT6Q9ULM6 557 aaKnown RBP20.85■□□□□ 0.93
RNF40-201ENST00000324685 MAP4K5Q9Y4K4 846 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 COLEC10Q9Y6Z7 277 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 C2orf71A6NGG8 1288 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 KERAO60938 352 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 OR6K2Q8NGY2 324 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 IL1RAPQ9NPH3 570 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 CLEC4AQ9UMR7 237 aa20.85■□□□□ 0.93
RNF40-201ENST00000324685 IDSP22304 550 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 RGS8P57771 180 aaPredicted RBP20.84■□□□□ 0.93
RNF40-201ENST00000324685 ATXN7L2Q5T6C5 722 aaPredicted RBP20.84■□□□□ 0.93
RNF40-201ENST00000324685 CPA6Q8N4T0 437 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 GPR152Q8TDT2 470 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 TRIM2Q9C040 744 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 UPB1Q9UBR1 384 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 TEX46H3BTG2 121 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 AKT2P31751 481 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 ZCCHC12Q6PEW1 402 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 CHRAC1Q9NRG0 131 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 DKK3Q9UBP4 350 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 REM1O75628 298 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 GLUD1P00367 558 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 UTS2BQ765I0 119 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 GPR135Q8IZ08 494 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 PIGKQ92643 395 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 TPK1Q9H3S4 243 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 FZD1Q9UP38 647 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 TIMM22Q9Y584 194 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 FAM172BPA6NC97 362 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 NPHS1O60500 1241 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 CWF19L1Q69YN2 538 aaKnown RBP20.84■□□□□ 0.93
RNF40-201ENST00000324685 TDRPQ86YL5 185 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 B3GNT5Q9BYG0 378 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 MGAT4AQ9UM21 535 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 PRPS2P11908 318 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 PRKAR2AP13861 404 aaKnown RBP20.84■□□□□ 0.93
RNF40-201ENST00000324685 TACR2P21452 398 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 SCRN3Q0VDG4 424 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 AHSA2Q719I0 299 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 IQCF2Q8IXL9 164 aa20.84■□□□□ 0.93
RNF40-201ENST00000324685 E2F2Q14209 437 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 LAPTM4BQ86VI4 370 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 NUSAP1Q9BXS6 441 aaKnown RBP20.83■□□□□ 0.93
RNF40-201ENST00000324685 TBC1D3DA0A087WVF3 549 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 TBC1D3IA0A087WXS9 549 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 TBC1D3EA0A087X179 549 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 TBC1D3KA0A087X1G2 549 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 TBC1D3FA6NER0 549 aaPredicted RBP20.83■□□□□ 0.93
RNF40-201ENST00000324685 TBC1D3LB9A6J9 549 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 AGRPO00253 132 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 AIREO43918 545 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 C4BPAP04003 597 aaKnown RBP20.83■□□□□ 0.93
RNF40-201ENST00000324685 TBC1D3HP0C7X1 549 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 CMPK1P30085 196 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 CORO1AP31146 461 aaKnown RBP20.83■□□□□ 0.93
RNF40-201ENST00000324685 CYP4F8P98187 520 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 TAF10Q12962 218 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 ARL13AQ5H913 290 aaPredicted RBP20.83■□□□□ 0.93
RNF40-201ENST00000324685 TBC1D3GQ6DHY5 549 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 TBC1D3CQ6IPX1 549 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 TMEM192Q8IY95 271 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 TBC1D3Q8IZP1 549 aaPredicted RBP20.83■□□□□ 0.93
RNF40-201ENST00000324685 MAB21L3Q8N8X9 362 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 NODALQ96S42 347 aa20.83■□□□□ 0.93
RNF40-201ENST00000324685 PCDH1Q08174 1060 aa20.83■□□□□ 0.92
RNF40-201ENST00000324685 DEFB132Q7Z7B7 95 aa20.83■□□□□ 0.92
RNF40-201ENST00000324685 RANBP3LQ86VV4 465 aaPredicted RBP20.83■□□□□ 0.92
RNF40-201ENST00000324685 CBR4Q8N4T8 237 aa20.83■□□□□ 0.92
RNF40-201ENST00000324685 SLC25A51Q9H1U9 297 aa20.83■□□□□ 0.92
RNF40-201ENST00000324685 FKBP14Q9NWM8 211 aa20.83■□□□□ 0.92
RNF40-201ENST00000324685 SLC22A2O15244 555 aa20.83■□□□□ 0.92
RNF40-201ENST00000324685 APODP05090 189 aa20.83■□□□□ 0.92
RNF40-201ENST00000324685 GJB1P08034 283 aa20.83■□□□□ 0.92
RNF40-201ENST00000324685 GLUD2P49448 558 aa20.83■□□□□ 0.92
RNF40-201ENST00000324685 TSC22D1Q15714 1073 aa20.83■□□□□ 0.92
RNF40-201ENST00000324685 ULK3Q6PHR2 472 aa20.83■□□□□ 0.92
RNF40-201ENST00000324685 UNC5BQ8IZJ1 945 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms