RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 PREPP48147 710 aa13.46□□□□□ -0.26
SRRM1-201ENST00000323848 SH3BP2P78314 561 aa13.46□□□□□ -0.26
SRRM1-201ENST00000323848 SLC39A13Q96H72 371 aa13.46□□□□□ -0.26
SRRM1-201ENST00000323848 TRIM15Q9C019 465 aa13.46□□□□□ -0.26
SRRM1-201ENST00000323848 TDP1Q9NUW8 608 aa13.46□□□□□ -0.26
SRRM1-201ENST00000323848 VPS4AQ9UN37 437 aa13.46□□□□□ -0.26
SRRM1-201ENST00000323848 ITM2BQ9Y287 266 aa13.46□□□□□ -0.26
SRRM1-201ENST00000323848 LRCH1Q9Y2L9 728 aa13.46□□□□□ -0.26
SRRM1-201ENST00000323848 A0A0G2JN53 185 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 EPCAMP16422 314 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 ARNTP27540 789 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 LCP2Q13094 533 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 XKR6Q5GH73 641 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 SLC30A9Q6PML9 568 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 ASRGL1Q7L266 308 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 ISCA2Q86U28 154 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 CFAP206Q8IYR0 622 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 LRTOMTQ8WZ04 291 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 JADE3Q92613 823 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 AP2M1Q96CW1 435 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 PTCD3Q96EY7 689 aaKnown RBP13.45□□□□□ -0.26
SRRM1-201ENST00000323848 PRICKLE1Q96MT3 831 aaPredicted RBP13.45□□□□□ -0.26
SRRM1-201ENST00000323848 CCT7Q99832 543 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 TDRD1Q9BXT4 1180 aaKnown RBP13.45□□□□□ -0.26
SRRM1-201ENST00000323848 ALG2Q9H553 416 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 BRD9Q9H8M2 597 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 CXXC1Q9P0U4 656 aaPredicted RBP13.45□□□□□ -0.26
SRRM1-201ENST00000323848 PABPC1P11940 636 aaKnown RBP13.45□□□□□ -0.26
SRRM1-201ENST00000323848 MAGEA6P43360 314 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 RIPK1Q13546 671 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 REP15Q6BDI9 236 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 OR2AP1Q8NGE2 309 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 CCDC106Q9BWC9 280 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 PDLIM1O00151 329 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 SNNO75324 88 aaPredicted RBP13.45□□□□□ -0.26
SRRM1-201ENST00000323848 ACADSP16219 412 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 IMPDH1P20839 514 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 PAX3P23760 479 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 SPAM1P38567 509 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 UFM1P61960 85 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 POLR2LP62875 67 aaKnown RBP13.45□□□□□ -0.26
SRRM1-201ENST00000323848 IRX1P78414 480 aaPredicted RBP13.45□□□□□ -0.26
SRRM1-201ENST00000323848 VAC14Q08AM6 782 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 CDC16Q13042 620 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 TRIM71Q2Q1W2 868 aaKnown RBP13.45□□□□□ -0.26
SRRM1-201ENST00000323848 TECRLQ5HYJ1 363 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 MMAAQ8IVH4 418 aaKnown RBP13.45□□□□□ -0.26
SRRM1-201ENST00000323848 SLC22A15Q8IZD6 547 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 TPD52L3Q96J77 140 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 SLC30A3Q99726 388 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 GRIP2Q9C0E4 1043 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 FAM83DQ9H4H8 585 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 SUV39H2Q9H5I1 410 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 DUS2Q9NX74 493 aaKnown RBP13.45□□□□□ -0.26
SRRM1-201ENST00000323848 B4GALT6Q9UBX8 382 aa13.45□□□□□ -0.26
SRRM1-201ENST00000323848 MGAT4DA6NG13 374 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 KRT6AP02538 564 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 KRT6BP04259 564 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 BMP1P13497 986 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 RPL10P27635 214 aaKnown RBP13.44□□□□□ -0.26
SRRM1-201ENST00000323848 KRT6CP48668 564 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 HERVK_113P63132 956 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 CACNG1Q06432 222 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 SQLEQ14534 574 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 MAVSQ7Z434 540 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 ADAMTSL2Q86TH1 951 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 STK40Q8N2I9 435 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 RTKNQ9BST9 563 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 ERVK-6Q9BXR3 956 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 STX18Q9P2W9 335 aaKnown RBP13.44□□□□□ -0.26
SRRM1-201ENST00000323848 RHOP08100 348 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 HOXD9P28356 352 aaPredicted RBP13.44□□□□□ -0.26
SRRM1-201ENST00000323848 PRKAA2P54646 552 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 PWP1Q13610 501 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 GRM2Q14416 872 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 MAPKAPK3Q16644 382 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 TPGS2Q68CL5 300 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 ERAP2Q6P179 960 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.44□□□□□ -0.26
SRRM1-201ENST00000323848 PHACTR4Q8IZ21 702 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 FAM120BQ96EK7 910 aaKnown RBP13.44□□□□□ -0.26
SRRM1-201ENST00000323848 NSMCE2Q96MF7 247 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 RIOK2Q9BVS4 552 aaKnown RBP13.44□□□□□ -0.26
SRRM1-201ENST00000323848 ZNF212Q9UDV6 495 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 SPTBN2O15020 2390 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 SDHDO14521 159 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 SLC22A3O75751 556 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 CHRM1P11229 460 aaPredicted RBP13.44□□□□□ -0.26
SRRM1-201ENST00000323848 CST5P28325 142 aaPredicted RBP13.44□□□□□ -0.26
SRRM1-201ENST00000323848 ETV3P41162 512 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 ARCN1P48444 511 aaKnown RBP13.44□□□□□ -0.26
SRRM1-201ENST00000323848 ATP6V0D1P61421 351 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 ARF5P84085 180 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 PLCL1Q15111 1095 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 TCTN1Q2MV58 587 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 FAM180BQ6P0A1 224 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 SIKE1Q9BRV8 207 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 CENPKQ9BS16 269 aa13.44□□□□□ -0.26
SRRM1-201ENST00000323848 SLC46A2Q9BY10 475 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms