RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 PTGER3P43115 390 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 ZNF792Q3KQV3 632 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 FBXL22Q6P050 247 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 MCFD2Q8NI22 146 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 FAM220BPB1ANY3 271 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 F2P00734 622 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 CDH1P12830 882 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 CRATP43155 626 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 BNIP3Q12983 259 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 NCF4Q15080 339 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 ZNF534Q76KX8 674 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 PAGE2Q7Z2X7 111 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 SLC45A3Q96JT2 553 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 CNOT11Q9UKZ1 510 aaKnown RBP14.59□□□□□ -0.07
TCOF1-201ENST00000323668 ACSL4O60488 711 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 GPC1P35052 558 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 KIR3DL1P43629 444 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 LEPRP48357 1165 aaKnown RBP14.59□□□□□ -0.07
TCOF1-201ENST00000323668 CACNG1Q06432 222 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 TAF1AQ15573 450 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-201ENST00000323668 TAPT1Q6NXT6 567 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 AARSD1Q9BTE6 412 aaKnown RBP14.59□□□□□ -0.07
TCOF1-201ENST00000323668 ABCG8Q9H221 673 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 ZFYVE1Q9HBF4 777 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 PCDH12Q9NPG4 1184 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 CCM2LQ9NUG4 571 aaPredicted RBP14.59□□□□□ -0.07
TCOF1-201ENST00000323668 ZIM2Q9NZV7 527 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 MAPRE3Q9UPY8 281 aa14.59□□□□□ -0.07
TCOF1-201ENST00000323668 CLIC3O95833 236 aa14.58□□□□□ -0.07
TCOF1-201ENST00000323668 TBX18O95935 607 aa14.58□□□□□ -0.07
TCOF1-201ENST00000323668 C1RP00736 705 aa14.58□□□□□ -0.07
TCOF1-201ENST00000323668 UGT1A6P19224 532 aa14.58□□□□□ -0.07
TCOF1-201ENST00000323668 UGT1A1P22309 533 aa14.58□□□□□ -0.07
TCOF1-201ENST00000323668 UGT1A4P22310 534 aa14.58□□□□□ -0.07
TCOF1-201ENST00000323668 UGT1A3P35503 534 aa14.58□□□□□ -0.07
TCOF1-201ENST00000323668 UGT1A5P35504 534 aa14.58□□□□□ -0.07
TCOF1-201ENST00000323668 SMAD3P84022 425 aaKnown RBP14.58□□□□□ -0.07
TCOF1-201ENST00000323668 KBTBD8Q8NFY9 601 aa14.58□□□□□ -0.07
TCOF1-201ENST00000323668 FUBP3Q96I24 572 aaKnown RBP eCLIP14.58□□□□□ -0.07
TCOF1-201ENST00000323668 APOLD1Q96LR9 279 aa14.58□□□□□ -0.07
TCOF1-201ENST00000323668 NSMCE3Q96MG7 304 aa14.58□□□□□ -0.07
TCOF1-201ENST00000323668 CGREF1Q99674 301 aa14.58□□□□□ -0.07
TCOF1-201ENST00000323668 MEAF6Q9HAF1 191 aa14.58□□□□□ -0.07
TCOF1-201ENST00000323668 H3BNH8 94 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 MFN2O95140 757 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 PPP4R4Q6NUP7 873 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 GLB1L3Q8NCI6 653 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-201ENST00000323668 CIPCQ9C0C6 399 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 RASSF1Q9NS23 344 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 SNX8Q9Y5X2 465 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-201ENST00000323668 PRORSD1PA6NEY8 169 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 H3BN98 237 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 CXCR6O00574 342 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 NIPSNAP2O75323 286 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 POLR2LP62875 67 aaKnown RBP14.58□□□□□ -0.08
TCOF1-201ENST00000323668 PWP1Q13610 501 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 UGT2A3Q6UWM9 527 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 OR6K2Q8NGY2 324 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 KIAA1191Q96A73 305 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 TSEN34Q9BSV6 310 aaKnown RBP14.58□□□□□ -0.08
TCOF1-201ENST00000323668 ARMC7Q9H6L4 198 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 DNAAF2Q9NVR5 837 aaKnown RBP14.58□□□□□ -0.08
TCOF1-201ENST00000323668 RGS10O43665 173 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 CD68P34810 354 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-201ENST00000323668 UFM1P61960 85 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 CYP20A1Q6UW02 462 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 CASP12Q6UXS9 341 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 KRT73Q86Y46 540 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 DEPDC4Q8N2C3 294 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 KLHL23Q8NBE8 558 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 FBXL20Q96IG2 436 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 PRICKLE1Q96MT3 831 aaPredicted RBP14.58□□□□□ -0.08
TCOF1-201ENST00000323668 TMEM74Q96NL1 305 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 KCNA7Q96RP8 456 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 ADAMTS10Q9H324 1103 aa14.58□□□□□ -0.08
TCOF1-201ENST00000323668 GOLGA4Q13439 2230 aaKnown RBP14.57□□□□□ -0.08
TCOF1-201ENST00000323668 A0A1W2PPW3 197 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 EFCAB10A6NFE3 127 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 CDC7O00311 574 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 NOBOXO60393 691 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 DUSP11O75319 330 aaKnown RBP14.57□□□□□ -0.08
TCOF1-201ENST00000323668 SNAI1O95863 264 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-201ENST00000323668 PENKP01210 267 aaPredicted RBP14.57□□□□□ -0.08
TCOF1-201ENST00000323668 IL6P05231 212 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 MAGEA3P43357 314 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 ENTPD1P49961 510 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 CBX3Q13185 183 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 ITIH5Q86UX2 942 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 SPATA17Q96L03 361 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 GPATCH1Q9BRR8 931 aaKnown RBP14.57□□□□□ -0.08
TCOF1-201ENST00000323668 PRKCGP05129 697 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 DIO3P55073 304 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 CDH4P55283 916 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 CYP4F3Q08477 520 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 FGD3Q5JSP0 725 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 TJAP1Q5JTD0 557 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 SLC24A5Q71RS6 500 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 DET1Q7L5Y6 550 aa14.57□□□□□ -0.08
TCOF1-201ENST00000323668 TBC1D19Q8N5T2 526 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms