RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 PIN4Q9Y237 131 aaKnown RBP17.71■□□□□ 0.43
PRKCB-202ENST00000321728 LOC100130705A0A1B0GUX0 176 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 NCF1BA6NI72 391 aaPredicted RBP17.7■□□□□ 0.42
PRKCB-202ENST00000321728 NCF1CA8MVU1 366 aaPredicted RBP17.7■□□□□ 0.42
PRKCB-202ENST00000321728 FZD9O00144 591 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 DNAJB5O75953 348 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 CHRNA1P02708 482 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 NCF1P14598 390 aaPredicted RBP17.7■□□□□ 0.42
PRKCB-202ENST00000321728 ZNF37AP17032 561 aaPredicted RBP17.7■□□□□ 0.42
PRKCB-202ENST00000321728 FSHRP23945 695 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 ILF2Q12905 390 aaKnown RBP17.7■□□□□ 0.42
PRKCB-202ENST00000321728 FXNQ16595 210 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 ANKS6Q68DC2 871 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 LAIR2Q6ISS4 152 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 TIGD7Q6NT04 549 aaPredicted RBP17.7■□□□□ 0.42
PRKCB-202ENST00000321728 KDELC1Q6UW63 502 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 ABI1Q8IZP0 508 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 PSMA8Q8TAA3 256 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 NT5MQ9NPB1 228 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 SCUBE2Q9NQ36 999 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 RNF112Q9ULX5 631 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 COL1A2P08123 1366 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 FAM234BA2RU67 622 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 GSTA4O15217 222 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 SLC2A3P11169 496 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 CCR1P32246 355 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 GRIK2Q13002 908 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 DGCR6Q14129 220 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 ENPP6Q6UWR7 440 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 OR6Q1Q8NGQ2 317 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 HTRA1Q92743 480 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 TBATAQ96M53 351 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 TMEM209Q96SK2 561 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 ATOH8Q96SQ7 321 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 C16orf70Q9BSU1 422 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 ALOXE3Q9BYJ1 711 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 CATSPERBQ9H7T0 1116 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 CARS2Q9HA77 564 aaKnown RBP17.7■□□□□ 0.42
PRKCB-202ENST00000321728 DNAJB9Q9UBS3 223 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 NEU3Q9UQ49 428 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 TMEM98Q9Y2Y6 226 aa17.7■□□□□ 0.42
PRKCB-202ENST00000321728 SLC25A27O95847 323 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 PRKACGP22612 351 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 TCEA1P23193 301 aaKnown RBP17.69■□□□□ 0.42
PRKCB-202ENST00000321728 SLC13A2Q13183 592 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 PRKG2Q13237 762 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 ATP6AP1LQ52LC2 224 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 UGT3A1Q6NUS8 523 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 CNIH3Q8TBE1 160 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 FAR1Q8WVX9 515 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 DACH2Q96NX9 599 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 RBM4BQ9BQ04 359 aaKnown RBP17.69■□□□□ 0.42
PRKCB-202ENST00000321728 RBM4Q9BWF3 364 aaKnown RBP17.69■□□□□ 0.42
PRKCB-202ENST00000321728 UGT2B28Q9BY64 529 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 BRINP2Q9C0B6 783 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 FBXO8Q9NRD0 319 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 MPP6Q9NZW5 540 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 LIMD1Q9UGP4 676 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 PMF1-BGLAPU3KQ54 211 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 FAM92AA1XBS5 289 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 PSMD11O00231 422 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 SEC24AO95486 1093 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 EIF2S1P05198 315 aaKnown RBP17.69■□□□□ 0.42
PRKCB-202ENST00000321728 PRR35P0CG20 571 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 ISL1P61371 349 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 RBBP7Q16576 425 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 HIST2H2ACQ16777 129 aaPredicted RBP17.69■□□□□ 0.42
PRKCB-202ENST00000321728 RAB41Q5JT25 222 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 CCDC81Q6ZN84 652 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 LINC00299Q6ZSB3 139 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 BHLHA9Q7RTU4 235 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 PAGE2Q7Z2X7 111 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 CYP2U1Q7Z449 544 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 GALNT7Q86SF2 657 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 DCBLD1Q8N8Z6 715 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 OR2T11Q8NH01 316 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 RHEBL1Q8TAI7 183 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 PROKR1Q8TCW9 393 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 ISG20Q96AZ6 181 aaKnown RBP17.69■□□□□ 0.42
PRKCB-202ENST00000321728 ZNF599Q96NL3 588 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 CGREF1Q99674 301 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 C17orf80Q9BSJ5 609 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 SLC25A51Q9H1U9 297 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 ARNT2Q9HBZ2 717 aa17.69■□□□□ 0.42
PRKCB-202ENST00000321728 DNAJC25-GNG10A0A024R161 153 aa17.68■□□□□ 0.42
PRKCB-202ENST00000321728 MGEA5O60502 916 aa17.68■□□□□ 0.42
PRKCB-202ENST00000321728 PAGE1O75459 146 aa17.68■□□□□ 0.42
PRKCB-202ENST00000321728 PAPSS2O95340 614 aaPredicted RBP17.68■□□□□ 0.42
PRKCB-202ENST00000321728 MAP2K4P45985 399 aa17.68■□□□□ 0.42
PRKCB-202ENST00000321728 HNRNPFP52597 415 aaKnown RBP17.68■□□□□ 0.42
PRKCB-202ENST00000321728 ERVK-8P63133 956 aa17.68■□□□□ 0.42
PRKCB-202ENST00000321728 PPP2R2BQ00005 443 aa17.68■□□□□ 0.42
PRKCB-202ENST00000321728 IL5RAQ01344 420 aa17.68■□□□□ 0.42
PRKCB-202ENST00000321728 FPGSQ05932 587 aa17.68■□□□□ 0.42
PRKCB-202ENST00000321728 BEND5Q7L4P6 421 aa17.68■□□□□ 0.42
PRKCB-202ENST00000321728 ARMC8Q8IUR7 673 aa17.68■□□□□ 0.42
PRKCB-202ENST00000321728 MCOLN3Q8TDD5 553 aa17.68■□□□□ 0.42
PRKCB-202ENST00000321728 FRS2Q8WU20 508 aa17.68■□□□□ 0.42
PRKCB-202ENST00000321728 NUDT8Q8WV74 236 aa17.68■□□□□ 0.42
PRKCB-202ENST00000321728 VTA1Q9NP79 307 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms