RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 SPATS2Q86XZ4 545 aaKnown RBP20.86■□□□□ 0.93
YBX1-201ENST00000321358 SUMF1Q8NBK3 374 aa20.86■□□□□ 0.93
YBX1-201ENST00000321358 SLC44A1Q8WWI5 657 aa20.86■□□□□ 0.93
YBX1-201ENST00000321358 OR1E3Q8WZA6 343 aa20.86■□□□□ 0.93
YBX1-201ENST00000321358 SCARF2Q96GP6 870 aaPredicted RBP20.86■□□□□ 0.93
YBX1-201ENST00000321358 PANX3Q96QZ0 392 aa20.86■□□□□ 0.93
YBX1-201ENST00000321358 PAFAH2Q99487 392 aa20.86■□□□□ 0.93
YBX1-201ENST00000321358 P2RY12Q9H244 342 aa20.86■□□□□ 0.93
YBX1-201ENST00000321358 RHOJQ9H4E5 214 aa20.86■□□□□ 0.93
YBX1-201ENST00000321358 ERVMER34-1Q9H9K5 563 aa20.86■□□□□ 0.93
YBX1-201ENST00000321358 MRPL40Q9NQ50 206 aaKnown RBP20.86■□□□□ 0.93
YBX1-201ENST00000321358 FAM86C1Q9NVL1 165 aa20.86■□□□□ 0.93
YBX1-201ENST00000321358 FETUBQ9UGM5 382 aa20.86■□□□□ 0.93
YBX1-201ENST00000321358 DNMT3AQ9Y6K1 912 aaPredicted RBP20.86■□□□□ 0.93
YBX1-201ENST00000321358 DGKBQ9Y6T7 804 aa20.86■□□□□ 0.93
YBX1-201ENST00000321358 PIEZO1Q92508 2521 aa20.86■□□□□ 0.93
YBX1-201ENST00000321358 PLXNA2O75051 1894 aa20.86■□□□□ 0.93
YBX1-201ENST00000321358 KLHL33A6NCF5 533 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 GSTM1P09488 218 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 NUDT17P0C025 328 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 CTSEP14091 401 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 ARRB1P49407 418 aaPredicted RBP20.85■□□□□ 0.93
YBX1-201ENST00000321358 SERPINB9P50453 376 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 HK3P52790 923 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 GSTM4Q03013 218 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 BCL7AQ4VC05 210 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 ZNF789Q5FWF6 425 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 ZC3HC1Q86WB0 502 aaKnown RBP20.85■□□□□ 0.93
YBX1-201ENST00000321358 GPATCH11Q8N954 259 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 ATXN7L3BQ96GX2 97 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 OR2M4Q96R27 311 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 SLC24A2Q9UI40 661 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 SCN8AQ9UQD0 1980 aa20.85■□□□□ 0.93
YBX1-201ENST00000321358 DFNA5O60443 496 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 DNAJC6O75061 913 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 KRT38O76015 456 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 TRIM16O95361 564 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 CSF2P04141 144 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 F7P08709 466 aaPredicted RBP20.84■□□□□ 0.93
YBX1-201ENST00000321358 H2AFXP16104 143 aaPredicted RBP20.84■□□□□ 0.93
YBX1-201ENST00000321358 JUNDP17535 347 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 CHRM3P20309 590 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 GABRB3P28472 473 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 CTSKP43235 329 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 PRLHRP49683 370 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 CTSCP53634 463 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 SLC12A2P55011 1212 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 HNRNPKP61978 463 aaKnown RBP eCLIP20.84■□□□□ 0.934e-6■■■■□ 21.7
YBX1-201ENST00000321358 EIF2B5Q13144 721 aaKnown RBP20.84■□□□□ 0.93
YBX1-201ENST00000321358 INSCQ1MX18 579 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 PYCR3Q53H96 274 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 PHACTR4Q8IZ21 702 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 PDXPQ96GD0 296 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 BIRC8Q96P09 236 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 RBBP8Q99708 897 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 CCM2Q9BSQ5 444 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 CAPN10Q9HC96 672 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 NCDNQ9UBB6 729 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 PRKAB1Q9Y478 270 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 SNX11Q9Y5W9 270 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 PRSS21Q9Y6M0 314 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 DOCK9Q9BZ29 2069 aa20.84■□□□□ 0.93
YBX1-201ENST00000321358 KPNA5O15131 536 aa20.83■□□□□ 0.93
YBX1-201ENST00000321358 KCNJ13O60928 360 aa20.83■□□□□ 0.93
YBX1-201ENST00000321358 POP7O75817 140 aaKnown RBP20.83■□□□□ 0.93
YBX1-201ENST00000321358 NME1P15531 152 aaKnown RBP20.83■□□□□ 0.93
YBX1-201ENST00000321358 ATXN3P54252 364 aaPredicted RBP20.83■□□□□ 0.93
YBX1-201ENST00000321358 LRP8Q14114 963 aa20.83■□□□□ 0.93
YBX1-201ENST00000321358 ZNF542PQ5EBM4 170 aa20.83■□□□□ 0.93
YBX1-201ENST00000321358 UGT3A1Q6NUS8 523 aa20.83■□□□□ 0.93
YBX1-201ENST00000321358 CHST15Q7LFX5 561 aaPredicted RBP20.83■□□□□ 0.93
YBX1-201ENST00000321358 AMZ2Q86W34 360 aa20.83■□□□□ 0.93
YBX1-201ENST00000321358 CCDC97Q96F63 343 aaPredicted RBP20.83■□□□□ 0.93
YBX1-201ENST00000321358 VPS39Q96JC1 886 aa20.83■□□□□ 0.93
YBX1-201ENST00000321358 ELMO2Q96JJ3 720 aa20.83■□□□□ 0.93
YBX1-201ENST00000321358 AARSD1Q9BTE6 412 aaKnown RBP20.83■□□□□ 0.93
YBX1-201ENST00000321358 TRNAU1APQ9NX07 287 aaKnown RBP20.83■□□□□ 0.93
YBX1-201ENST00000321358 APOBEC3BQ9UH17 382 aaKnown RBP20.83■□□□□ 0.93
YBX1-201ENST00000321358 ZNF180Q9UJW8 692 aa20.83■□□□□ 0.93
YBX1-201ENST00000321358 PLAAQ9Y263 795 aa20.83■□□□□ 0.93
YBX1-201ENST00000321358 SPAG17Q6Q759 2223 aa20.83■□□□□ 0.93
YBX1-201ENST00000321358 PATE3B3GLJ2 98 aa20.83■□□□□ 0.92
YBX1-201ENST00000321358 ARHGAP33O14559 1287 aa20.83■□□□□ 0.92
YBX1-201ENST00000321358 VPS26AO75436 327 aa20.83■□□□□ 0.92
YBX1-201ENST00000321358 KRT37O76014 449 aa20.83■□□□□ 0.92
YBX1-201ENST00000321358 SHBGP04278 402 aa20.83■□□□□ 0.92
YBX1-201ENST00000321358 CNTFP26441 200 aa20.83■□□□□ 0.92
YBX1-201ENST00000321358 ABCG1P45844 678 aa20.83■□□□□ 0.92
YBX1-201ENST00000321358 ILF3Q12906 894 aaKnown RBP eCLIP20.83■□□□□ 0.92
YBX1-201ENST00000321358 GRIK2Q13002 908 aa20.83■□□□□ 0.92
YBX1-201ENST00000321358 FAM45BPQ6NSW5 357 aa20.83■□□□□ 0.92
YBX1-201ENST00000321358 FBXO38Q6PIJ6 1188 aa20.83■□□□□ 0.92
YBX1-201ENST00000321358 BEND7Q8N7W2 519 aaPredicted RBP20.83■□□□□ 0.92
YBX1-201ENST00000321358 FAM45AQ8TCE6 357 aa20.83■□□□□ 0.92
YBX1-201ENST00000321358 NAT14Q8WUY8 206 aa20.83■□□□□ 0.92
YBX1-201ENST00000321358 KCNJ9Q92806 393 aa20.83■□□□□ 0.92
YBX1-201ENST00000321358 ELF4Q99607 663 aaPredicted RBP20.83■□□□□ 0.92
YBX1-201ENST00000321358 ROPN1BQ9BZX4 212 aaPredicted RBP20.83■□□□□ 0.92
YBX1-201ENST00000321358 ROPN1Q9HAT0 212 aaPredicted RBP20.83■□□□□ 0.92
YBX1-201ENST00000321358 TAS2R13Q9NYV9 303 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms