RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 ELOVL4Q9GZR5 314 aa16.47■□□□□ 0.23
PACS1-201ENST00000320580 PXMP2Q9NR77 195 aa16.47■□□□□ 0.23
PACS1-201ENST00000320580 RGS17Q9UGC6 210 aaPredicted RBP16.47■□□□□ 0.23
PACS1-201ENST00000320580 LACTBL1A8MY62 500 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 MYL12BO14950 172 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 ALX3O95076 343 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 NFICP08651 508 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 MVKQ03426 396 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 CLCA4Q14CN2 919 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 GARNL3Q5VVW2 1013 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 BHLHB9Q6PI77 547 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 SLC2A11Q9BYW1 496 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 CCSER2Q9H7U1 834 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 LATS2Q9NRM7 1088 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 AGPAT4Q9NRZ5 378 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 FAM118AQ9NWS6 357 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 KCNH4Q9UQ05 1017 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 A8MT66 165 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 ERN1O75460 977 aaKnown RBP16.46■□□□□ 0.23
PACS1-201ENST00000320580 CACNB2Q08289 660 aaPredicted RBP16.46■□□□□ 0.23
PACS1-201ENST00000320580 FAM109AQ8N4B1 249 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 TDRD1Q9BXT4 1180 aaKnown RBP16.46■□□□□ 0.23
PACS1-201ENST00000320580 NUFIP1Q9UHK0 495 aaKnown RBP16.46■□□□□ 0.23
PACS1-201ENST00000320580 IGKV6D-41A0A0C4DH26 115 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 MEN1O00255 615 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 MDM4O15151 490 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 GJA9P57773 515 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 ATAD3CQ5T2N8 411 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 PKN3Q6P5Z2 889 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 PORCNQ9H237 461 aa16.46■□□□□ 0.23
PACS1-201ENST00000320580 FABP12A6NFH5 140 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 UNCXA6NJT0 531 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 ACOX3O15254 700 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 RPS3P23396 243 aaKnown RBP eCLIP16.45■□□□□ 0.22
PACS1-201ENST00000320580 HMBOX1Q6NT76 420 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 OTOP3Q7RTS5 596 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 LDB1Q86U70 411 aaPredicted RBP16.45■□□□□ 0.22
PACS1-201ENST00000320580 PIGZQ86VD9 579 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 BBS7Q8IWZ6 715 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 OR10Q1Q8NGQ4 319 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 MALT1Q9UDY8 824 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 CFL2Q9Y281 166 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 UBIAD1Q9Y5Z9 338 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 ZNF541Q9H0D2 1346 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 GMPSP49915 693 aaPredicted RBP16.45■□□□□ 0.22
PACS1-201ENST00000320580 GRSF1Q12849 480 aaKnown RBP eCLIP16.45■□□□□ 0.22
PACS1-201ENST00000320580 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.45■□□□□ 0.22
PACS1-201ENST00000320580 ZC3HC1Q86WB0 502 aaKnown RBP16.45■□□□□ 0.22
PACS1-201ENST00000320580 ZDHHC17Q8IUH5 632 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 TMEM132CQ8N3T6 1108 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 WDR36Q8NI36 951 aaKnown RBP16.45■□□□□ 0.22
PACS1-201ENST00000320580 TXNDC15Q96J42 360 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 ACO2Q99798 780 aaKnown RBP16.45■□□□□ 0.22
PACS1-201ENST00000320580 NT5MQ9NPB1 228 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 ARHGAP28Q9P2N2 729 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 ZNF70Q9UC06 446 aaPredicted RBP16.45■□□□□ 0.22
PACS1-201ENST00000320580 SSR3Q9UNL2 185 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 MAPRE3Q9UPY8 281 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 MAGED1Q9Y5V3 778 aaPredicted RBP16.45■□□□□ 0.22
PACS1-201ENST00000320580 AP2A2O94973 939 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 MYL9P24844 172 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 S100A3P33764 101 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 CLCN3P51790 818 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 RPL38P63173 70 aaKnown RBP16.45■□□□□ 0.22
PACS1-201ENST00000320580 GPR153Q6NV75 609 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 SPATA19Q7Z5L4 167 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 STAG3L4Q8TBR4 150 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 CRISPLD1Q9H336 500 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 AS3MTQ9HBK9 375 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 TOGARAM1Q9Y4F4 1720 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 IL6P05231 212 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 CHRM5P08912 532 aaPredicted RBP16.45■□□□□ 0.22
PACS1-201ENST00000320580 LCN1P1Q5VSP4 162 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 SIGIRRQ6IA17 410 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 ILDR2Q71H61 639 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 NOXA1Q86UR1 476 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 EFHBQ8N7U6 833 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 PPP1R2P1Q96PQ5 205 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 MED28Q9H204 178 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 LYVE1Q9Y5Y7 322 aa16.45■□□□□ 0.22
PACS1-201ENST00000320580 AHSGP02765 367 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 PPP2R2BQ00005 443 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 LAMTOR4Q0VGL1 99 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 DACT2Q5SW24 774 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 SZRD1Q7Z422 152 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 ADGRG5Q8IZF4 528 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 KDM1BQ8NB78 822 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 DEDD2Q8WXF8 326 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 FCGR1BQ92637 280 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 FCRL3Q96P31 734 aaPredicted RBP16.44■□□□□ 0.22
PACS1-201ENST00000320580 FTHL17Q9BXU8 183 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 UCK2Q9BZX2 261 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 DUS2Q9NX74 493 aaKnown RBP16.44■□□□□ 0.22
PACS1-201ENST00000320580 WWOXQ9NZC7 414 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 ADAM30Q9UKF2 790 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 POLR3HQ9Y535 204 aaPredicted RBP16.44■□□□□ 0.22
PACS1-201ENST00000320580 PCDHGB6Q9Y5F9 930 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 PCDHGA8Q9Y5G5 932 aa16.44■□□□□ 0.22
PACS1-201ENST00000320580 MYO18AQ92614 2054 aaKnown RBP16.44■□□□□ 0.22
PACS1-201ENST00000320580 DHX15O43143 795 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms