RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ZNF225Q9UK10 706 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 PCTPQ9UKL6 214 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 FBP2O00757 339 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 GRM6O15303 877 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 MOSPD3O75425 235 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 ESRRBO95718 433 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 MLYCDO95822 493 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 PABPC1P11940 636 aaKnown RBP7.48□□□□□ -1.21
IFT88-201ENST00000319980 TYRP14679 529 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 ACADSP16219 412 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 ACRV1P26436 265 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 WEE1P30291 646 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 IRS1P35568 1242 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 SPAM1P38567 509 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 MS4A2Q01362 244 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 C18orf21Q32NC0 220 aaPredicted RBP7.48□□□□□ -1.21
IFT88-201ENST00000319980 LY6G5CQ5SRR4 150 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 TPRG1Q6ZUI0 275 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 Q6ZVU0 165 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 DHDDSQ86SQ9 333 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 KBTBD2Q8IY47 623 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 OR52B6Q8NGF0 335 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 SPPL3Q8TCT6 385 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 GRIN3AQ8TCU5 1115 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 LKAAEAR1Q8TD35 194 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 IRF7Q92985 503 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 PLEKHG4BQ96PX9 1271 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 ZNF184Q99676 751 aaPredicted RBP7.48□□□□□ -1.21
IFT88-201ENST00000319980 SLC25A23Q9BV35 468 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 POLG2Q9UHN1 485 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 GNPTGQ9UJJ9 305 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 SLC25A13Q9UJS0 675 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 DOCK6Q96HP0 2047 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 C9JVG2 144 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 E2F3O00716 465 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 PER2O15055 1255 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 NRP2O60462 931 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 EPCAMP16422 314 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 PFKLP17858 780 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 ME2P23368 584 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 PSME3P61289 254 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 PTSQ03393 145 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 FPGSQ05932 587 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 PPIGQ13427 754 aaKnown RBP eCLIP7.48□□□□□ -1.213e-6■■■□□ 15.4
IFT88-201ENST00000319980 RPS6KA2Q15349 733 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 ARHGAP15Q53QZ3 475 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 REP15Q6BDI9 236 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 GRAMD4Q6IC98 578 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 IZUMO2Q6UXV1 221 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 RFLNAQ6ZTI6 216 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 USP45Q70EL2 814 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 FUNDC1Q8IVP5 155 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 ADGRG2Q8IZP9 1017 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 CDYL2Q8N8U2 506 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 OR56A4Q8NGH8 313 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 ZSWIM3Q96MP5 696 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 HTATIP2Q9BUP3 242 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 C1QTNF3Q9BXJ4 246 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 SPHK2Q9NRA0 654 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 PCDHGA7Q9Y5G6 932 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 WNT6Q9Y6F9 365 aa7.48□□□□□ -1.21
IFT88-201ENST00000319980 E7ENX8 843 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 FFAR2O15552 330 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 OR4F21O95013 312 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 POP4O95707 220 aaKnown RBP7.47□□□□□ -1.21
IFT88-201ENST00000319980 CHEK2O96017 543 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 LBPP18428 481 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 GPX3P22352 226 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 LHCGRP22888 699 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 ACADVLP49748 655 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 RGS4P49798 205 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 DIO3P55073 304 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 MRPS22P82650 360 aaKnown RBP7.47□□□□□ -1.21
IFT88-201ENST00000319980 LRP8Q14114 963 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 CARD16Q5EG05 197 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 TMEM240Q5SV17 173 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 SBSNQ6UWP8 590 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 GRASPQ7Z6J2 395 aaPredicted RBP7.47□□□□□ -1.21
IFT88-201ENST00000319980 ADAMTSL2Q86TH1 951 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 PHYKPLQ8IUZ5 450 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 MYO1HQ8N1T3 1032 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 NXPE1Q8N323 547 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 CHST14Q8NCH0 376 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 ZNF483Q8TF39 744 aaPredicted RBP7.47□□□□□ -1.21
IFT88-201ENST00000319980 SORCS1Q8WY21 1168 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 ING5Q8WYH8 240 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 ATP6V1E2Q96A05 226 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 ISG20Q96AZ6 181 aaKnown RBP7.47□□□□□ -1.21
IFT88-201ENST00000319980 ECHDC3Q96DC8 303 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 PDLIM5Q96HC4 596 aaKnown RBP7.47□□□□□ -1.21
IFT88-201ENST00000319980 LYSMD1Q96S90 227 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 SLC39A3Q9BRY0 314 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 APOL5Q9BWW9 433 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 NSUN3Q9H649 340 aaKnown RBP7.47□□□□□ -1.21
IFT88-201ENST00000319980 NOL11Q9H8H0 719 aaKnown RBP7.47□□□□□ -1.21
IFT88-201ENST00000319980 BRD9Q9H8M2 597 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 LATS2Q9NRM7 1088 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 ADAMTS6Q9UKP5 1117 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 C5orf42Q9H799 3197 aa7.47□□□□□ -1.21
IFT88-201ENST00000319980 TRBV5-4A0A0C4DH59 114 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms