RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ACBD3Q9H3P7 528 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 TMBIM4Q9HC24 238 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 TRIM39Q9HCM9 518 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 CYP4F12Q9HCS2 524 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 FSCN3Q9NQT6 498 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 TMEM74BQ9NUR3 256 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 FBXO4Q9UKT5 387 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 RUVBL2Q9Y230 463 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 MED16Q9Y2X0 877 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 VWA7Q9Y334 891 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 KMT2EQ8IZD2 1858 aa15.19■□□□□ 0.02
PDLIM5-202ENST00000318007 PIKFYVEQ9Y2I7 2098 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 A6NNZ2 444 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 MT-ND3P03897 115 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 WNT1P04628 370 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 CD27P26842 260 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 HOXA6P31267 233 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 GNPDA1P46926 289 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 MAGOHP61326 146 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 PDAP1Q13442 181 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 SEPT7Q16181 437 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 CCDC6Q16204 474 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 LGSNQ5TDP6 509 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 TDRPQ86YL5 185 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 ZNF547Q8IVP9 402 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 GIMAP7Q8NHV1 300 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 MZB1Q8WU39 189 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 TM9SF3Q9HD45 589 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 KCTD5Q9NXV2 234 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 FETUBQ9UGM5 382 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 SUFUQ9UMX1 484 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 VPS9D1Q9Y2B5 631 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 PLEKHM1Q9Y4G2 1056 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 GPSM3Q9Y4H4 160 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 SPAG17Q6Q759 2223 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 IGLV3-16A0A075B6K0 115 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 CCDC163A0A0D9SF12 145 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 SGTAO43765 313 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 ESR1P03372 595 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 OR56A5P0C7T3 313 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 STMN1P16949 149 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 SERPINB9P50453 376 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 TIAL1Q01085 375 aaKnown RBP eCLIP15.18■□□□□ 0.024e-8■■■■□ 22.5
PDLIM5-202ENST00000318007 HSPA14Q0VDF9 509 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 ITIH4Q14624 930 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 LYSMD4Q5XG99 296 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 DENND6BQ8NEG7 585 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 SKA2Q8WVK7 121 aaPredicted RBP15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 DUSP15Q9H1R2 295 aaPredicted RBP15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 CARS2Q9HA77 564 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 GPAMQ9HCL2 828 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 ZNF358Q9NW07 568 aa15.18■□□□□ 0.02
PDLIM5-202ENST00000318007 PRR33A8MZF0 331 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 H3BQF6 201 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 RFPL1O75677 317 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 CEACAM5P06731 702 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 PYGLP06737 847 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 ACP5P13686 325 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 CD38P28907 300 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 PREPP48147 710 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 GLRBP48167 497 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 PFN3P60673 137 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 SIM2Q14190 667 aaPredicted RBP15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 PLK5Q496M5 336 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 PMS2CLQ68D20 193 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 FAM45BPQ6NSW5 357 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 OTOAQ7RTW8 1153 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 HID1Q8IV36 788 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 CPNE9Q8IYJ1 553 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 FAM45AQ8TCE6 357 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 ELMO1Q92556 727 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 PIGKQ92643 395 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 TMEM109Q9BVC6 243 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 ZCCHC2Q9C0B9 1178 aaKnown RBP15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 OSGEPL1Q9H4B0 414 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 TAS2R13Q9NYV9 303 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 DMTF1Q9Y222 760 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 PLXND1Q9Y4D7 1925 aa15.17■□□□□ 0.02
PDLIM5-202ENST00000318007 A0A096LPK6 155 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 PRSS38A1L453 326 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 OPA1O60313 960 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 VPS26AO75436 327 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 HTR1BP28222 390 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 CCR7P32248 378 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 SERPINB8P50452 374 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 RAB10P61026 200 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 IRX4P78413 519 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 NFATC4Q14934 902 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 INSCQ1MX18 579 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 HSP90B2PQ58FF3 399 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 PAQR3Q6TCH7 311 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 TMEM207Q6UWW9 146 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 TRABD2AQ86V40 505 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 EXOC3L1Q86VI1 746 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 NLRP8Q86W28 1048 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 RIBC1Q8N443 379 aaPredicted RBP15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 OR56A4Q8NGH8 313 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 ANKRD49Q8WVL7 239 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 OR1E3Q8WZA6 343 aa15.16■□□□□ 0.02
PDLIM5-202ENST00000318007 KLHDC7BQ96G42 594 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms