RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 ARHGEF6Q15052 776 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 UAP1L1Q3KQV9 507 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 FAM72AQ5TYM5 149 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 FAM72DQ6L9T8 149 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 ZNF773Q6PK81 442 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 METTL7BQ6UX53 244 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 SPATC1Q76KD6 591 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 FAM72BQ86X60 149 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 SLC15A3Q8IY34 581 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 SETD9Q8NE22 299 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 C19orf18Q8NEA5 215 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 LPCAT1Q8NF37 534 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 NDNFQ8TB73 568 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 SPPL2BQ8TCT7 592 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 STON2Q8WXE9 905 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 OLFM1Q99784 485 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 STRA6Q9BX79 667 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 RHOBTB2Q9BYZ6 727 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 GPR63Q9BZJ6 419 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 HDHD2Q9H0R4 259 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 CATSPERBQ9H7T0 1116 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 PDP1Q9P0J1 537 aaPredicted RBP7.46□□□□□ -1.21
CDHR3-201ENST00000317716 UXTQ9UBK9 157 aaPredicted RBP7.46□□□□□ -1.21
CDHR3-201ENST00000317716 POLG2Q9UHN1 485 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 TRHDEQ9UKU6 1024 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 KCTD3Q9Y597 815 aa7.46□□□□□ -1.21
CDHR3-201ENST00000317716 LTBP1Q14766 1721 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 MDM4O15151 490 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 PMM2O15305 246 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 NBNO60934 754 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 BCAS1O75363 584 aaPredicted RBP7.46□□□□□ -1.22
CDHR3-201ENST00000317716 GPIP06744 558 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 SLC26A3P40879 764 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 PLA2G16P53816 162 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 SNRPD2P62316 118 aaKnown RBP7.46□□□□□ -1.22
CDHR3-201ENST00000317716 GSTM4Q03013 218 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 MAP2K5Q13163 448 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.46□□□□□ -1.22
CDHR3-201ENST00000317716 ATAD3BQ5T9A4 648 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 SYCE2Q6PIF2 218 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 BTLAQ7Z6A9 289 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 GPSM1Q86YR5 675 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 GALNT12Q8IXK2 581 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 PHACTR4Q8IZ21 702 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 SCML4Q8N228 414 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 TMEM246Q9BRR3 403 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 CENPOQ9BU64 300 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 TMEM134Q9H6X4 195 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 INIPQ9NRY2 104 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 PIGVQ9NUD9 493 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 SH3BP4Q9P0V3 963 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 ERVK-18Q9QC07 812 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 EIF2B4Q9UI10 523 aaKnown RBP7.46□□□□□ -1.22
CDHR3-201ENST00000317716 UBQLN1Q9UMX0 589 aaKnown RBP7.46□□□□□ -1.22
CDHR3-201ENST00000317716 PRG3Q9Y2Y8 225 aaPredicted RBP7.46□□□□□ -1.22
CDHR3-201ENST00000317716 ZNF451Q9Y4E5 1061 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 ARFGEF1Q9Y6D6 1849 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 IQCF5A8MTL0 148 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 PQBP1O60828 265 aaKnown RBP7.46□□□□□ -1.22
CDHR3-201ENST00000317716 KCNA5P22460 613 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 GLDCP23378 1020 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 POLR2IP36954 125 aaKnown RBP7.46□□□□□ -1.22
CDHR3-201ENST00000317716 ARSFP54793 590 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 OR4D2P58180 307 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 ZSWIM7Q19AV6 140 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 SLC10A6Q3KNW5 377 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 PYDC2Q56P42 97 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 TRIQKQ629K1 86 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 PPP4R4Q6NUP7 873 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 LYSMD3Q7Z3D4 306 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 ZNF605Q86T29 641 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 CCDC117Q8IWD4 279 aaPredicted RBP7.46□□□□□ -1.22
CDHR3-201ENST00000317716 TMEM102Q8N9M5 508 aaPredicted RBP7.46□□□□□ -1.22
CDHR3-201ENST00000317716 OR56A4Q8NGH8 313 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 GPR152Q8TDT2 470 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 ASZ1Q8WWH4 475 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 RPL3LQ92901 407 aaKnown RBP7.46□□□□□ -1.22
CDHR3-201ENST00000317716 TMEM106CQ9BVX2 250 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 REEP1Q9H902 201 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 PAQR5Q9NXK6 330 aaPredicted RBP7.46□□□□□ -1.22
CDHR3-201ENST00000317716 TAS2R13Q9NYV9 303 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 STMN3Q9NZ72 180 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 SPASTQ9UBP0 616 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 SYNPO2Q9UMS6 1093 aa7.46□□□□□ -1.22
CDHR3-201ENST00000317716 MRPS7Q9Y2R9 242 aaKnown RBP7.46□□□□□ -1.22
CDHR3-201ENST00000317716 ILVBLA1L0T0 632 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 CCDC182A6NF36 153 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 YJEFN3A6XGL0 299 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 FAM25AB3EWG3 89 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 FAM25CB3EWG5 89 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 FAM25GB3EWG6 89 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 AQP9O43315 295 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 MSCO60682 206 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 ABCB7O75027 752 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 MAFO75444 373 aaPredicted RBP7.45□□□□□ -1.22
CDHR3-201ENST00000317716 DNTTP04053 509 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 SLC35E2BP0CK96 405 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 IDO1P14902 403 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 MSH3P20585 1137 aa7.45□□□□□ -1.22
CDHR3-201ENST00000317716 S100A3P33764 101 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms