RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ERGIC3Q9Y282 383 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 TDRD15B5MCY1 1934 aaKnown RBP18.9■□□□□ 0.62
RTN4-201ENST00000317610 MOXD2PA6NHM9 499 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 M0QZ92 97 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 MUSKO15146 869 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 RSL1D1O76021 490 aaKnown RBP18.9■□□□□ 0.62
RTN4-201ENST00000317610 ANXA6P08133 673 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 PRSS56P0CW18 603 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 CCR3P51677 355 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 GALNT3Q14435 633 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 PARP15Q460N3 678 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 NIPAL1Q6NVV3 410 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 MON1AQ86VX9 555 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 NKAPQ8N5F7 415 aaKnown RBP18.9■□□□□ 0.62
RTN4-201ENST00000317610 IGSF8Q969P0 613 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 ACOX2Q99424 681 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 NLE1Q9NVX2 485 aaPredicted RBP18.9■□□□□ 0.62
RTN4-201ENST00000317610 FAM50BQ9Y247 325 aa18.9■□□□□ 0.62
RTN4-201ENST00000317610 NPEPPSL1A6NEC2 478 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 J3QRK9 145 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 GGT1P19440 569 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 FMO4P31512 558 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 ZNF140P52738 457 aaPredicted RBP18.89■□□□□ 0.61
RTN4-201ENST00000317610 GABARAPL2P60520 117 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 YWHAHQ04917 246 aaPredicted RBP18.89■□□□□ 0.61
RTN4-201ENST00000317610 NR1D2Q14995 579 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 FAM98BQ52LJ0 330 aaKnown RBP18.89■□□□□ 0.61
RTN4-201ENST00000317610 GRAMD4Q6IC98 578 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 GALNT18Q6P9A2 607 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 SCIMPQ6UWF3 145 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 GPRIN3Q6ZVF9 776 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 FKBP9P1Q75LS8 142 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 R3HCC1LQ7Z5L2 792 aaKnown RBP18.89■□□□□ 0.61
RTN4-201ENST00000317610 RALGPS2Q86X27 583 aaPredicted RBP18.89■□□□□ 0.61
RTN4-201ENST00000317610 C8orf59Q8N0T1 100 aaPredicted RBP18.89■□□□□ 0.61
RTN4-201ENST00000317610 SPARTQ8N0X7 666 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 ITFG1Q8TB96 612 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 HASPINQ8TF76 798 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 FBXL8Q96CD0 374 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 CCDC115Q96NT0 180 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 PIF1Q9H611 641 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 PAIP2BQ9ULR5 123 aaKnown RBP18.89■□□□□ 0.61
RTN4-201ENST00000317610 CCL15-CCL14A0A0B4J2E2 113 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 UBA6A0AVT1 1052 aaPredicted RBP18.89■□□□□ 0.61
RTN4-201ENST00000317610 DRGXA6NNA5 263 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 CFAP99D6REC4 459 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 ENPP3O14638 875 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 RAMP2O60895 175 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 TYMPP19971 482 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 MAPK10P53779 464 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 PLA2G16P53816 162 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 MLLT10P55197 1068 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 SELPLGQ14242 412 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 CCL15Q16663 113 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 TTC23Q5W5X9 447 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 FBXL22Q6P050 247 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 Q6ZSR9 355 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 AADATQ8N5Z0 425 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 FNDC5Q8NAU1 212 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 BPIFB6Q8NFQ5 453 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 FKBP10Q96AY3 582 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 TRIB3Q96RU7 358 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 ZNF382Q96SR6 550 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 FEM1AQ9BSK4 669 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 MAGEE1Q9HCI5 957 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 NEUROG3Q9Y4Z2 214 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 ST14Q9Y5Y6 855 aa18.89■□□□□ 0.61
RTN4-201ENST00000317610 TRPM7Q96QT4 1865 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 C16orf96A6NNT2 1141 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 IFRD1O00458 451 aaPredicted RBP18.88■□□□□ 0.61
RTN4-201ENST00000317610 PRAMEF11O60813 436 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 TSPAN12O95859 305 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 PSMA3P25788 255 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 EPS8Q12929 822 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 RBBP7Q16576 425 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 RGS21Q2M5E4 152 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 ATP6AP1LQ52LC2 224 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 ALG1LQ6GMV1 187 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 STK32CQ86UX6 486 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 CLEC4FQ8N1N0 589 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 PJA1Q8NG27 643 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 BRI3BPQ8WY22 251 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 SUSD3Q96L08 255 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 CGREF1Q99674 301 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 GPR21Q99679 349 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 TOR3AQ9H497 397 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 COMMD8Q9NX08 183 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 SMPD4Q9NXE4 827 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 GALPQ9UBC7 116 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 RGS17Q9UGC6 210 aaPredicted RBP18.88■□□□□ 0.61
RTN4-201ENST00000317610 BTN3A1O00481 513 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 E2F3O00716 465 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 COQ9O75208 318 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 NDST3O95803 873 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 POMCP01189 267 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 PIRTP0C851 137 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 HK3P52790 923 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 GSTM4Q03013 218 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 CHRNB3Q05901 458 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 FAM110CQ1W6H9 321 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms