RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PMPCBO75439 489 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF37AP17032 561 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 PAX3P23760 479 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 POLR2IP36954 125 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CASP2P42575 452 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 SH3BP2P78314 561 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ABRQ12979 859 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ADPRMQ3LIE5 342 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 C6orf183Q5T699 404 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 C9orf57Q5W0N0 161 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 NOTUMQ6P988 496 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CCBE1Q6UXH8 406 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 USP43Q70EL4 1123 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 PIWIL3Q7Z3Z3 882 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 TSPYL5Q86VY4 417 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ZFAND4Q86XD8 727 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 PEX5LQ8IYB4 626 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 TMEM86AQ8N2M4 240 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 SPATA6LQ8N4H0 392 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 DTWD1Q8N5C7 304 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 GPR150Q8NGU9 434 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 FBLIM1Q8WUP2 373 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 SLC13A3Q8WWT9 602 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 TTC9Q92623 222 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ULBP1Q9BZM6 244 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 AFG3L2Q9Y4W6 797 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 LCHNA4D1U4 455 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 PIRO00625 290 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 SCO2O43819 266 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 AIREO43918 545 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 VPS26AO75436 327 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ALX3O95076 343 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 IL6P05231 212 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 SLC2A3P11169 496 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ARNTP27540 789 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 PCSK1P29120 753 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ADRA1AP35348 466 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 SOX6P35712 828 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 RAD51Q06609 339 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 MAPK11Q15759 364 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ZBTB6Q15916 424 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 PFKFB4Q16877 469 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 OTUD1Q5VV17 481 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 KIAA0319Q5VV43 1072 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 GPRIN3Q6ZVF9 776 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 C11orf74Q86VG3 221 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 TRIM69Q86WT6 500 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 B3GALNT2Q8NCR0 500 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 C9orf43Q8TAL5 461 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 FAR1Q8WVX9 515 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 NCLNQ969V3 563 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 DCPSQ96C86 337 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 C3orf30Q96M34 536 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 THUMPD3Q9BV44 507 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 GON7Q9BXV9 100 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ACSS2Q9NR19 701 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 SAMD4AQ9UPU9 718 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 NOTOA8MTQ0 251 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 TNFRSF10AO00220 468 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 PRMT5O14744 637 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 TSPAN1O60635 241 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 S1PR4O95977 384 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 FGF1P05230 155 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 TXNP10599 105 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 M6PRP20645 277 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 HOXC13P31276 330 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 SHMT2P34897 504 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 COPZ1P61923 177 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CDK5R2Q13319 367 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 DNASE1L3Q13609 305 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CLCA4Q14CN2 919 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 TBCEQ15813 527 aaPredicted RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 GPR158Q5T848 1215 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CACHD1Q5VU97 1274 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 FAM35AQ86V20 835 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 LYSMD2Q8IV50 215 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CARNMT1Q8N4J0 409 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ZNF540Q8NDQ6 660 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CLEC4CQ8WTT0 213 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 FAM162AQ96A26 154 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 MED30Q96HR3 178 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 ITPAQ9BY32 194 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 DERL2Q9GZP9 239 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 DYRK4Q9NR20 520 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 CCDC59Q9P031 241 aaKnown RBP4.73□□□□□ -1.65
PTPN13-201ENST00000316707 GMPPBQ9Y5P6 360 aa4.73□□□□□ -1.65
PTPN13-201ENST00000316707 TTC34A8MYJ7 566 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 HAT1O14929 419 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 ARHGEF9O43307 516 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 FTH1P02794 183 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 NCK1P16333 377 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 EFNA1P20827 205 aaPredicted RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 HRH2P25021 359 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 LHX1P48742 406 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 GP2P55259 537 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 CSTF3Q12996 717 aaKnown RBP4.72□□□□□ -1.65
PTPN13-201ENST00000316707 QSER1Q2KHR3 1735 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 TOR1AIP1Q5JTV8 583 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 TPRG1LQ5T0D9 272 aa4.72□□□□□ -1.65
PTPN13-201ENST00000316707 SYPL2Q5VXT5 272 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms