RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 A8MXE2 369 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 ZNF814B7Z6K7 855 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 J3KR12 359 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 LDB2O43679 373 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 KIF1CO43896 1103 aaKnown RBP4.05□□□□□ -1.76
SMCO3-201ENST00000316048 AVILO75366 819 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 TADA2AO75478 443 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 BAG4O95429 457 aaKnown RBP4.05□□□□□ -1.76
SMCO3-201ENST00000316048 ABCB1P08183 1280 aaPredicted RBP4.05□□□□□ -1.76
SMCO3-201ENST00000316048 CHRNB2P17787 502 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 TBXAS1P24557 533 aaPredicted RBP4.05□□□□□ -1.76
SMCO3-201ENST00000316048 MC5RP33032 325 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 HSPA1LP34931 641 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 COPB2P35606 906 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 BUD31P41223 144 aaPredicted RBP4.05□□□□□ -1.76
SMCO3-201ENST00000316048 LMAN1P49257 510 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 SPOCK1Q08629 439 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 C9orf152Q5JTZ5 239 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 SLC10A5Q5PT55 438 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 HECTD3Q5T447 861 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 SLC2A7Q6PXP3 512 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 TTC30BQ8N4P2 665 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 APOLD1Q96LR9 279 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 CEP295NLQ96MC4 621 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 SEPT5Q99719 369 aaPredicted RBP4.05□□□□□ -1.76
SMCO3-201ENST00000316048 PCGF1Q9BSM1 259 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 PPP1R3EQ9H7J1 279 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 NARFQ9UHQ1 456 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 ANAPC2Q9UJX6 822 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 SMC3Q9UQE7 1217 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 ERVK-11Q9UQG0 969 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 MYRFQ9Y2G1 1151 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 AFF2P51816 1311 aa4.05□□□□□ -1.76
SMCO3-201ENST00000316048 WDR33Q9C0J8 1336 aaKnown RBP4.05□□□□□ -1.76
SMCO3-201ENST00000316048 I6L893 689 aaPredicted RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 JRKO75564 520 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 SLCO2B1O94956 709 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 ZWINTO95229 277 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 PRKCGP05129 697 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 ICAM1P05362 532 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 ADORA1P30542 326 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 P2RX3P56373 397 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 ID2Q02363 134 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 DDR1Q08345 913 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 FOXF2Q12947 444 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 SNTB1Q13884 538 aaKnown RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 KCNC3Q14003 757 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 ADIPOQQ15848 244 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 ZNF284Q2VY69 593 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 LETM2Q2VYF4 491 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 SOWAHCQ53LP3 525 aaPredicted RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 SHQ1Q6PI26 577 aaKnown RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 TSPAN33Q86UF1 283 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 ZNF589Q86UQ0 364 aaPredicted RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 GGNQ86UU5 652 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 SFTPA2Q8IWL1 248 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 RNF168Q8IYW5 571 aaPredicted RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 MRPS27Q92552 414 aaKnown RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 PTERQ96BW5 349 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 ZNF570Q96NI8 536 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 CDRT15Q96T59 188 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 CCDC106Q9BWC9 280 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 HINT3Q9NQE9 182 aaKnown RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 PPIEQ9UNP9 301 aaKnown RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 ATP6V1DQ9Y5K8 247 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 CICQ96RK0 1608 aaPredicted RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 SPEF2Q9C093 1822 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 A6NL46 340 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 B8ZZF3 427 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 PPP6CO00743 305 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 TIMM23O14925 209 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 PRPF4O43172 522 aaKnown RBP eCLIP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 TLX3O43711 291 aaPredicted RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 MMP3P08254 477 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 MYBL1P10243 752 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 HSPD1P10809 573 aaKnown RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 ENO3P13929 434 aaPredicted RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 RFC4P35249 363 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 CXCL9Q07325 125 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 BAATQ14032 418 aaPredicted RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 DAZAP2Q15038 168 aaPredicted RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 IMMTQ16891 758 aaKnown RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 ZXDCQ2QGD7 858 aaPredicted RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 Q4G0T1 1027 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 B3GNT6Q6ZMB0 384 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 YTHDF3Q7Z739 585 aaKnown RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 UBE2Q1Q7Z7E8 422 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 NBPF5PQ86XG9 351 aaPredicted RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 SLC44A5Q8NCS7 719 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 PTPMT1Q8WUK0 201 aaPredicted RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 RMDN1Q96DB5 314 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 GOLPH3LQ9H4A5 285 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 DNAJC18Q9H819 358 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 CLK4Q9HAZ1 481 aaKnown RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 SEBOXQ9HB31 216 aaPredicted RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 ZNHIT2Q9UHR6 403 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 RCOR1Q9UKL0 485 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 DDX49Q9Y6V7 483 aaKnown RBP4.04□□□□□ -1.76
SMCO3-201ENST00000316048 RREB1Q92766 1687 aa4.04□□□□□ -1.76
SMCO3-201ENST00000316048 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms