RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 CBX6O95503 412 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 BMPR1AP36894 532 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 TAS2R50P59544 299 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 MYBPC1Q00872 1141 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 KLHL12Q53G59 568 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 PPM1JQ5JR12 505 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 PIK3R6Q5UE93 754 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 CDCA2Q69YH5 1023 aaPredicted RBP13.36□□□□□ -0.27
RFFL-201ENST00000315249 PEX5LQ8IYB4 626 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 OR2AP1Q8NGE2 309 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 PCDH19Q8TAB3 1148 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 KLHDC7BQ96G42 594 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 NDC1Q9BTX1 674 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 DTLQ9NZJ0 730 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 AP3M1Q9Y2T2 418 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 SMIM31A0A1B0GVY4 71 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 GSTM5P46439 218 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 AP1ARQ63HQ0 302 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 AZIN2Q96A70 460 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 TWNKQ96RR1 684 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 MYLK3Q32MK0 819 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 FAM220AQ7Z4H9 259 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 LRRTM4Q86VH4 590 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 DENND6AQ8IWF6 608 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 CADM2Q8N3J6 435 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 BHLHE22Q8NFJ8 381 aaPredicted RBP13.36□□□□□ -0.27
RFFL-201ENST00000315249 BTBD10Q9BSF8 475 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 LRRC4CQ9HCJ2 640 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 PNPLA8Q9NP80 782 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 DMAC2Q9NW81 257 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 MAP4K5Q9Y4K4 846 aa13.36□□□□□ -0.27
RFFL-201ENST00000315249 HLA-DQB2P05538 268 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 KLK3P07288 261 aaPredicted RBP13.35□□□□□ -0.27
RFFL-201ENST00000315249 EN2P19622 333 aaPredicted RBP13.35□□□□□ -0.27
RFFL-201ENST00000315249 BRAT1Q6PJG6 821 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 RDH11Q8TC12 318 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 EFR3BQ9Y2G0 817 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 A0A1W2PPM1 405 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 DDX3YO15523 660 aaKnown RBP13.35□□□□□ -0.27
RFFL-201ENST00000315249 PDE9AO76083 593 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 RB1P06400 928 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 TBC1D25Q3MII6 688 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 MAMDC4Q6UXC1 1216 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 SNX20Q7Z614 316 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 TMEM145Q8NBT3 493 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 VPS35Q96QK1 796 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 PCBD2Q9H0N5 130 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 KCNK4Q9NYG8 393 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 STATHP02808 62 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 TALDO1P37837 337 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 PLGLB1Q02325 96 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 BST1Q10588 318 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 LYSMD3Q7Z3D4 306 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 GPR141Q7Z602 305 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 ADGRG6Q86SQ4 1221 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 ZNF598Q86UK7 904 aaKnown RBP13.35□□□□□ -0.27
RFFL-201ENST00000315249 OR13C4Q8NGS5 318 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 FAXDC2Q96IV6 333 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 C8orf48Q96LL4 319 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 SLC2A4RGQ9NR83 387 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 AK5Q9Y6K8 562 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 COCHO43405 550 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 LYPLA1O75608 230 aaPredicted RBP13.35□□□□□ -0.27
RFFL-201ENST00000315249 SLC10A7Q0GE19 358 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 EPS8Q12929 822 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 CUZD1Q86UP6 607 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 KCTD13Q8WZ19 329 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 GPR174Q9BXC1 333 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 GKP32189 559 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 CASRP41180 1078 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 UBAP2LQ14157 1087 aaKnown RBP13.35□□□□□ -0.27
RFFL-201ENST00000315249 OFCC1Q8IZS5 231 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 PCYT2Q99447 389 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 MYLK2Q9H1R3 596 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 ACSS3Q9H6R3 686 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 GDAP2Q9NXN4 497 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 OR51F1A6NGY5 319 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 PEX12O00623 359 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 CLDN7O95471 211 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 PIGRP01833 764 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 IDO1P14902 403 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 MRPS22P82650 360 aaKnown RBP13.35□□□□□ -0.27
RFFL-201ENST00000315249 CREB5Q02930 508 aa13.35□□□□□ -0.27
RFFL-201ENST00000315249 NSUN3Q9H649 340 aaKnown RBP13.35□□□□□ -0.27
RFFL-201ENST00000315249 SLC22A3O75751 556 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 C8GP07360 202 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 GJA5P36382 358 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 PTGER3P43115 390 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 CASP9P55211 416 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 CHRNA6Q15825 494 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 BTN2A1Q7KYR7 527 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.34□□□□□ -0.27
RFFL-201ENST00000315249 ATXN2LQ8WWM7 1075 aaKnown RBP13.34□□□□□ -0.27
RFFL-201ENST00000315249 AGAP2Q99490 1192 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 CLCA3PQ9Y6N3 262 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 PRRC2BQ5JSZ5 2229 aaKnown RBP13.34□□□□□ -0.27
RFFL-201ENST00000315249 TEX28O15482 410 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 ANXA4P09525 319 aaPredicted RBP13.34□□□□□ -0.27
RFFL-201ENST00000315249 TSPAN19P0C672 248 aa13.34□□□□□ -0.27
RFFL-201ENST00000315249 ZCCHC18P0CG32 403 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms