RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TUBGCP3Q96CW5 907 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 TCF12Q99081 682 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 APOL5Q9BWW9 433 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 TRIM8Q9BZR9 551 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 PREBQ9HCU5 417 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 ADA2Q9NZK5 511 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 GMPR2Q9P2T1 348 aaKnown RBP12.29□□□□□ -0.44
RNF4-201ENST00000314289 ATXN10Q9UBB4 475 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 FAM8A1Q9UBU6 413 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 C15orf38-AP3S2A0A0A6YYH1 394 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 PSMD12O00232 456 aaPredicted RBP12.29□□□□□ -0.44
RNF4-201ENST00000314289 AZIN1O14977 448 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 HNRNPRO43390 633 aaKnown RBP12.29□□□□□ -0.44
RNF4-201ENST00000314289 CYBBP04839 570 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 PABPC4LP0CB38 370 aaKnown RBP12.29□□□□□ -0.44
RNF4-201ENST00000314289 CACNG1Q06432 222 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 RALGDSQ12967 914 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 CEACAM7Q14002 265 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 MAP7Q14244 749 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 RBBP7Q16576 425 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 AAGABQ6PD74 315 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 ARPINQ7Z6K5 226 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 FAM217AQ8IXS0 508 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 ADGRG2Q8IZP9 1017 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 CLYBLQ8N0X4 340 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 GPR26Q8NDV2 337 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 OR52B6Q8NGF0 335 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 RHEBL1Q8TAI7 183 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 PLEKHG4BQ96PX9 1271 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 MAGEE1Q9HCI5 957 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 LMCD1Q9NZU5 365 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 INSL6Q9Y581 213 aa12.29□□□□□ -0.44
RNF4-201ENST00000314289 GBF1Q92538 1859 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 CCNT2O60583 730 aaKnown RBP12.28□□□□□ -0.44
RNF4-201ENST00000314289 SNX2O60749 519 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 LATS1O95835 1130 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 RHOP08100 348 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 ATP6V1B1P15313 513 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 CLCN7P51798 805 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 MTTPP55157 894 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 MS4A2Q01362 244 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 NFATC2Q13469 925 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 HABP4Q5JVS0 413 aaKnown RBP12.28□□□□□ -0.44
RNF4-201ENST00000314289 DET1Q7L5Y6 550 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 GRASPQ7Z6J2 395 aaPredicted RBP12.28□□□□□ -0.44
RNF4-201ENST00000314289 GPSM1Q86YR5 675 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 AFAP1L2Q8N4X5 818 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 MRPL43Q8N983 215 aaKnown RBP12.28□□□□□ -0.44
RNF4-201ENST00000314289 ICA1LQ8NDH6 482 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 CLPBQ9H078 707 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 ATP13A3Q9H7F0 1226 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 CERS4Q9HA82 394 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 MBD1Q9UIS9 605 aaPredicted RBP12.28□□□□□ -0.44
RNF4-201ENST00000314289 CRLS1Q9UJA2 301 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 ZNF225Q9UK10 706 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 KRT87PA6NCN2 255 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 GRXCR1A8MXD5 290 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 PRMT5O14744 637 aaPredicted RBP12.28□□□□□ -0.44
RNF4-201ENST00000314289 MTX2O75431 263 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 KATNA1O75449 491 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 SLC25A14O95258 325 aaPredicted RBP12.28□□□□□ -0.44
RNF4-201ENST00000314289 IGSF6O95976 241 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 SOX11P35716 441 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 GDF5P43026 501 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 CHN2P52757 468 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 HK2P52789 917 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 INHBCP55103 352 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 FOLH1Q04609 750 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 LY6G5CQ5SRR4 150 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 LRRC66Q68CR7 880 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 FBXO46Q6PJ61 603 aaPredicted RBP12.28□□□□□ -0.44
RNF4-201ENST00000314289 LARP4Q71RC2 724 aaKnown RBP eCLIP12.28□□□□□ -0.44
RNF4-201ENST00000314289 VOPP1Q96AW1 172 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 ASIC4Q96FT7 647 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 LRCH3Q96II8 777 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 HGH1Q9BTY7 390 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 DDX18Q9NVP1 670 aaKnown RBP12.28□□□□□ -0.44
RNF4-201ENST00000314289 HACD3Q9P035 362 aa12.28□□□□□ -0.44
RNF4-201ENST00000314289 MYOCOSA0A1B0GUC4 107 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 FBP2O00757 339 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 MOSPD3O75425 235 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 SERPINA4P29622 427 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 PRDX6P30041 224 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 PTGER3P43115 390 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 CLCN4P51793 760 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 DIO3P55073 304 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 NFKB2Q00653 900 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 TGFBIQ15582 683 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 PLA2G4EQ3MJ16 856 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 ANKS6Q68DC2 871 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 BNC2Q6ZN30 1099 aaPredicted RBP12.27□□□□□ -0.44
RNF4-201ENST00000314289 SYVN1Q86TM6 617 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 CDYL2Q8N8U2 506 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 NUDT8Q8WV74 236 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 C1orf50Q9BV19 199 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 EMILIN2Q9BXX0 1053 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 EFCAB1Q9HAE3 211 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 POPDC3Q9HBV1 291 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 GALNT8Q9NY28 637 aa12.27□□□□□ -0.44
RNF4-201ENST00000314289 GLYATL1P3A0A0U1RQE8 302 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms