RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 CBSP35520 551 aa16.51■□□□□ 0.23
CLCF1-201ENST00000312438 GALK1P51570 392 aa16.51■□□□□ 0.23
CLCF1-201ENST00000312438 METAP1P53582 386 aa16.51■□□□□ 0.23
CLCF1-201ENST00000312438 EGFLAMQ63HQ2 1017 aa16.51■□□□□ 0.23
CLCF1-201ENST00000312438 ANKS6Q68DC2 871 aa16.51■□□□□ 0.23
CLCF1-201ENST00000312438 ADAMTSL2Q86TH1 951 aa16.51■□□□□ 0.23
CLCF1-201ENST00000312438 MMAAQ8IVH4 418 aaKnown RBP16.51■□□□□ 0.23
CLCF1-201ENST00000312438 SUGP1Q8IWZ8 645 aaKnown RBP16.51■□□□□ 0.23
CLCF1-201ENST00000312438 ACOX2Q99424 681 aa16.51■□□□□ 0.23
CLCF1-201ENST00000312438 C1QTNF3Q9BXJ4 246 aa16.51■□□□□ 0.23
CLCF1-201ENST00000312438 ABCG8Q9H221 673 aa16.51■□□□□ 0.23
CLCF1-201ENST00000312438 KCTD5Q9NXV2 234 aa16.51■□□□□ 0.23
CLCF1-201ENST00000312438 LNPEPQ9UIQ6 1025 aa16.51■□□□□ 0.23
CLCF1-201ENST00000312438 SIX3O95343 332 aaPredicted RBP16.5■□□□□ 0.23
CLCF1-201ENST00000312438 TNFRSF4P43489 277 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 ENPP2Q13822 863 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 COL19A1Q14993 1142 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 TGFBIQ15582 683 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 FAM46CQ5VWP2 391 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 ACAD11Q709F0 780 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 RPS27LQ71UM5 84 aaKnown RBP16.5■□□□□ 0.23
CLCF1-201ENST00000312438 ERN2Q76MJ5 926 aaKnown RBP16.5■□□□□ 0.23
CLCF1-201ENST00000312438 CYP2U1Q7Z449 544 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 C10orf67Q8IYJ2 551 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 SMRP1Q8NCR6 262 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 CSGALNACT1Q8TDX6 532 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 BTN2A2Q8WVV5 523 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 PTCD3Q96EY7 689 aaKnown RBP16.5■□□□□ 0.23
CLCF1-201ENST00000312438 COQ10AQ96MF6 247 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 VPS35Q96QK1 796 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 CCDC28BQ9BUN5 200 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 NUF2Q9BZD4 464 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 FBRSL1Q9HCM7 1045 aaKnown RBP16.5■□□□□ 0.23
CLCF1-201ENST00000312438 TCF7L2Q9NQB0 619 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 CACNA2D2Q9NY47 1150 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 CD274Q9NZQ7 290 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 ITM2BQ9Y287 266 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 TRAF6Q9Y4K3 522 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 STON1Q9Y6Q2 735 aa16.5■□□□□ 0.23
CLCF1-201ENST00000312438 ANHXE9PGG2 379 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 UBFD1O14562 309 aaKnown RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 AP2A2O94973 939 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 ESRRAP11474 423 aaPredicted RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 POU3F3P20264 500 aaPredicted RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 MSH3P20585 1137 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 EEF1DP29692 281 aaKnown RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 AKT1P31749 480 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 HK3P52790 923 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 CDH13P55290 713 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 ACSBG2Q5FVE4 666 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 CYHR1Q6ZMK1 362 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 DDHD1Q8NEL9 900 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 RAB7BQ96AH8 199 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 AP2M1Q96CW1 435 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 SLC7A6OSQ96CW6 309 aaPredicted RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 WRAP53Q9BUR4 548 aaKnown RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 HDAC8Q9BY41 377 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 LRMDAQ9H2I8 198 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 NUDT4Q9NZJ9 180 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 TRIM33Q9UPN9 1127 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 CDYLQ9Y232 598 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 LAMA3Q16787 3333 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 NCF1BA6NI72 391 aaPredicted RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 NCF1CA8MVU1 366 aaPredicted RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 EIF3FO00303 357 aaPredicted RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 NEMP1O14524 444 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 KPNA5O15131 536 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 SPINT1O43278 529 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 FGF4P08620 206 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 NCF1P14598 390 aaPredicted RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 NQO1P15559 274 aaKnown RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 AOC1P19801 751 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 NCF2P19878 526 aaPredicted RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 PTPN4P29074 926 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 HTR4Q13639 388 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 TMEM52BQ4KMG9 183 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 LDLRAP1Q5SW96 308 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 CHRDL2Q6WN34 429 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 FRA10AC1Q70Z53 315 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 CHPFQ8IZ52 775 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 CLYBLQ8N0X4 340 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 DTD2Q96FN9 168 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 P2RY13Q9BPV8 354 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 FAM126AQ9BYI3 521 aaPredicted RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 PRO3102Q9H379 93 aa16.49■□□□□ 0.23
CLCF1-201ENST00000312438 WDR55Q9H6Y2 383 aaPredicted RBP16.49■□□□□ 0.23
CLCF1-201ENST00000312438 ANTXRLA6NF34 631 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 FADS2P1A8MWK0 482 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 TMEM233B4DJY2 109 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 QSOX1O00391 747 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 RAD51BO15315 384 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 RPS17P08708 135 aaKnown RBP16.48■□□□□ 0.23
CLCF1-201ENST00000312438 ENO3P13929 434 aaPredicted RBP16.48■□□□□ 0.23
CLCF1-201ENST00000312438 GM2AP17900 193 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 AOAHP28039 575 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 EPHA3P29320 983 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 CCR7P32248 378 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 SOX9P48436 509 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 SH3BP2P78314 561 aa16.48■□□□□ 0.23
CLCF1-201ENST00000312438 CREB5Q02930 508 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms