RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 ZNF347Q96SE7 839 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 C20orf96Q9NUD7 363 aaPredicted RBP9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 PLA2G4CQ9UP65 541 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 SCN5AQ14524 2016 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 TANC1Q9C0D5 1861 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 ST8SIA5O15466 376 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 TGDSO95455 350 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 PROS1P07225 676 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 KCNA5P22460 613 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 CRHR1P34998 444 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 NUDT1P36639 197 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 AP2S1P53680 142 aaPredicted RBP9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 ABCE1P61221 599 aaKnown RBP9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 GPNMBQ14956 572 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 HEATR6Q6AI08 1181 aaKnown RBP9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 SCD5Q86SK9 330 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 CNTD1Q8N815 330 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 SLC7A14Q8TBB6 771 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 COLEC11Q9BWP8 271 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 LIN7BQ9HAP6 207 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 MRM3Q9HC36 420 aaKnown RBP9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 CASS4Q9NQ75 786 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 ZNF224Q9NZL3 707 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 CDH7Q9ULB5 785 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 PADI4Q9UM07 663 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 PTCH2Q9Y6C5 1203 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 KIAA1671Q9BY89 1806 aa9.45□□□□□ -0.9
RBFOX1-201ENST00000311745 SYNJ2BP-COX16A0A087WUM0 186 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 A0A0G2JMP0 313 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 SH3D21A4FU49 640 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 H0Y858 1186 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 ZNF195O14628 629 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 SYN3O14994 580 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 ZBTB24O43167 697 aaPredicted RBP9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 MT-ND3P03897 115 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 CD53P19397 219 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 CYP2C18P33260 490 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 TSPAN7P41732 249 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 LHX1P48742 406 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 ELOAQ14241 798 aaKnown RBP9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 RAB39AQ14964 217 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 TBRG1Q3YBR2 411 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 INTS6LQ5JSJ4 861 aaKnown RBP9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 GNASQ5JWF2 1037 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 BROXQ5VW32 411 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 ATG16L1Q676U5 607 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 NECAB2Q7Z6G3 386 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 CCDC36Q8IYA8 594 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 MINDY2Q8NBR6 621 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 EDEM1Q92611 657 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 FAM149B1Q96BN6 582 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 TESCQ96BS2 214 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 TXNDC15Q96J42 360 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 SDHAF3Q9NRP4 125 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 COX16Q9P0S2 106 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 A0A0U1RQF3 1178 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 LINC00587B1AMM8 73 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 KCNK1O00180 336 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 EEF2KO00418 725 aaKnown RBP9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 ATG13O75143 517 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 VNN2O95498 520 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 GNRH1P01148 92 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 LTFP02788 710 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 ASGR1P07306 291 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 FGF3P11487 239 aaPredicted RBP9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 AIF1P55008 147 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 ERVK-21P61565 698 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 CCINQ13939 588 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 FRG1Q14331 258 aaKnown RBP9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 GPR68Q15743 365 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 FAM91A1Q658Y4 838 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 MBLAC2Q68D91 279 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 ERAP2Q6P179 960 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 CFAP77Q6ZQR2 320 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 PTAR1Q7Z6K3 402 aaPredicted RBP9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 TMEM135Q86UB9 458 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 MICU2Q8IYU8 434 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 RNF148Q8N7C7 305 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 ABHD11Q8NFV4 315 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 JADE3Q92613 823 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 HDAC11Q96DB2 347 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 SH3YL1Q96HL8 342 aaPredicted RBP9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 OSBPL11Q9BXB4 747 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 FAM126AQ9BYI3 521 aaPredicted RBP9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 DNMT3BQ9UBC3 853 aaKnown RBP9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 PSMD13Q9UNM6 376 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 ANKRD6Q9Y2G4 727 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 VWA7Q9Y334 891 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 ZNF175Q9Y473 711 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 TESMINQ9Y4I5 508 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 SHOXO15266 292 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 SNAP91O60641 907 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 PEX11BO96011 259 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 KELP23276 732 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 CST5P28325 142 aaPredicted RBP9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 PRIM2P49643 509 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 ALDH6A1Q02252 535 aaKnown RBP9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 PRKCZQ05513 592 aa9.44□□□□□ -0.9
RBFOX1-201ENST00000311745 PCDH1Q08174 1060 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms