RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 VIPP01282 170 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 GSTM1P09488 218 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 GPR3P46089 330 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 GSTM4Q03013 218 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 BCL7AQ4VC05 210 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 KHDC1Q4VXA5 237 aaKnown RBP19.51■□□□□ 0.71
VEGFB-201ENST00000309422 DNAJC21Q5F1R6 531 aaKnown RBP19.51■□□□□ 0.71
VEGFB-201ENST00000309422 PERM1Q5SV97 790 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 NAGSQ8N159 534 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 GABPB2Q8TAK5 448 aaPredicted RBP19.51■□□□□ 0.71
VEGFB-201ENST00000309422 SLC37A2Q8TED4 501 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 CXorf40BQ96DE9 158 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 NXPE2Q96DL1 559 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 STRADBQ9C0K7 418 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 SYBUQ9NX95 663 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 TBC1D29Q9UFV1 150 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 TMPRSS11EQ9UL52 423 aa19.51■□□□□ 0.71
VEGFB-201ENST00000309422 MAGEB16A2A368 324 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 SDR42E2A6NKP2 422 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 AGAP14A8MT82 685 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 GOT2P00505 430 aaKnown RBP19.5■□□□□ 0.71
VEGFB-201ENST00000309422 FTH1P02794 183 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 SLC35G4P0C7Q5 338 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 OR56A5P0C7T3 313 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 ALDH4A1P30038 563 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 FASLGP48023 281 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 TTPAP49638 278 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 CTSCP53634 463 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 IZUMO3Q5VZ72 239 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 MRNIPQ6NTE8 343 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 MAATS1Q7Z4T9 603 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 SDCCAG8Q86SQ7 713 aaPredicted RBP19.5■□□□□ 0.71
VEGFB-201ENST00000309422 HOOK3Q86VS8 718 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 CACTIN-AS1Q8N1I8 211 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 SFRP1Q8N474 314 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 OR13J1Q8NGT2 312 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 OR10G6Q8NH81 332 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 ZNF592Q92610 1267 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 SGF29Q96ES7 293 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 SERPINB12Q96P63 405 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 KRT12Q99456 494 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 LRRN3Q9H3W5 708 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 SARS2Q9NP81 518 aaKnown RBP19.5■□□□□ 0.71
VEGFB-201ENST00000309422 CHRAC1Q9NRG0 131 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 KCNK4Q9NYG8 393 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 AKAP7Q9P0M2 348 aaPredicted RBP19.5■□□□□ 0.71
VEGFB-201ENST00000309422 FAM8A1Q9UBU6 413 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 MAD1L1Q9Y6D9 718 aa19.5■□□□□ 0.71
VEGFB-201ENST00000309422 TDRD6O60522 2096 aaKnown RBP19.49■□□□□ 0.71
VEGFB-201ENST00000309422 FAM149AA5PLN7 773 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 MGAT4DA6NG13 374 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 DNALI1O14645 258 aaPredicted RBP19.49■□□□□ 0.71
VEGFB-201ENST00000309422 DUX1O43812 170 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 TMEM63AO94886 807 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 TOP3BO95985 862 aaKnown RBP19.49■□□□□ 0.71
VEGFB-201ENST00000309422 PRLHRP49683 370 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 CRADDP78560 199 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 DMPKQ09013 629 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 TARDBPQ13148 414 aaKnown RBP eCLIP19.49■□□□□ 0.71
VEGFB-201ENST00000309422 CLPPQ16740 277 aaPredicted RBP19.49■□□□□ 0.71
VEGFB-201ENST00000309422 SYTL3Q4VX76 610 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 RNF187Q5TA31 235 aaPredicted RBP19.49■□□□□ 0.71
VEGFB-201ENST00000309422 IYDQ6PHW0 289 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 CCNI2Q6ZMN8 369 aaPredicted RBP19.49■□□□□ 0.71
VEGFB-201ENST00000309422 SPRED1Q7Z699 444 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 JAMLQ86YT9 394 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 ZNF547Q8IVP9 402 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 RBM12BQ8IXT5 1001 aaKnown RBP19.49■□□□□ 0.71
VEGFB-201ENST00000309422 MPP5Q8N3R9 675 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 BBOF1Q8ND07 529 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 HM13Q8TCT9 377 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 TMEM74Q96NL1 305 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 PRDM8Q9NQV8 689 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 POT1Q9NUX5 634 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 SLC2A6Q9UGQ3 507 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 ACSL5Q9ULC5 683 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 SOX13Q9UN79 622 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 PCYT1BQ9Y5K3 369 aaPredicted RBP19.49■□□□□ 0.71
VEGFB-201ENST00000309422 SCN8AQ9UQD0 1980 aa19.49■□□□□ 0.71
VEGFB-201ENST00000309422 TRBV23OR9-2A0A075B6M9 112 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 TRBV5-4A0A0C4DH59 114 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 TCRBV7S3A2A0A539 114 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 CSO75390 466 aaKnown RBP19.48■□□□□ 0.71
VEGFB-201ENST00000309422 PSMA3P25788 255 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 FOXN2P32314 431 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 ARSDP51689 593 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 GPLD1P80108 840 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 ACVR1Q04771 509 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 KRT33BQ14525 404 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 DBN1Q16643 649 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 AMZ1Q400G9 498 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 AGAP9Q5VTM2 703 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 ANKRD22Q5VYY1 191 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 WASH2PQ6VEQ5 465 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 PACS1Q6VY07 963 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 DCBLD1Q8N8Z6 715 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 OR2L2Q8NH16 312 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 PATE1Q8WXA2 126 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 SNF8Q96H20 258 aa19.48■□□□□ 0.71
VEGFB-201ENST00000309422 DPYSL5Q9BPU6 564 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms