RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PRR23AA6NEV1 266 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 C16orf96A6NNT2 1141 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 SUPT3HB4E1H0 165 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 STX16-NPEPL1H3BU86 382 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 BTN3A1O00481 513 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 STX16O14662 325 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 SUPT3HO75486 399 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 PRNPP04156 253 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 COL4A2P08572 1712 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 HNRNPLP14866 589 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRIM40-205ENST00000307859 PTPN4P29074 926 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 MMP12P39900 470 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 NSG1P42857 185 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 NAA20P61599 178 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 ZXDAP98168 799 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 ATP13A5Q4VNC0 1218 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 FNDC3BQ53EP0 1204 aaKnown RBP11.74□□□□□ -0.53
TRIM40-205ENST00000307859 ATAT1Q5SQI0 421 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 SH2D4BQ5SQS7 431 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 C9orf64Q5T6V5 341 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 PARS2Q7L3T8 475 aaKnown RBP11.74□□□□□ -0.53
TRIM40-205ENST00000307859 ASCL5Q7RTU5 278 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 HSD11B1LQ7Z5J1 315 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 CUZD1Q86UP6 607 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 ZNF366Q8N895 744 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 ELSPBP1Q96BH3 223 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 MAELQ96JY0 434 aaKnown RBP11.74□□□□□ -0.53
TRIM40-205ENST00000307859 CCDC28BQ9BUN5 200 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 C1QTNF3Q9BXJ4 246 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 PLA2G2FQ9BZM2 168 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 SHCBP1LQ9BZQ2 653 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 S1PR5Q9H228 398 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 TMEM245Q9H330 911 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 TCF7L2Q9NQB0 619 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 LATS2Q9NRM7 1088 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 RAD18Q9NS91 495 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 CLEC1BQ9P126 229 aa11.74□□□□□ -0.53
TRIM40-205ENST00000307859 ZFC3H1O60293 1989 aaKnown RBP11.74□□□□□ -0.53
TRIM40-205ENST00000307859 RGSL1A5PLK6 1076 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 TRPC5OSA6NMA1 111 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 PRR5-ARHGAP8B1AHC4 643 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 MBTPS2O43462 519 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 SUPT7LO94864 414 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 RPS17P08708 135 aaKnown RBP11.73□□□□□ -0.53
TRIM40-205ENST00000307859 KRT16P08779 473 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 GFAPP14136 432 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 AVPR2P30518 371 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 GJA4P35212 333 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 EIF2DP41214 584 aaKnown RBP11.73□□□□□ -0.53
TRIM40-205ENST00000307859 NBL1P41271 181 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 ARHGAP8P85298 464 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 B4GALNT1Q00973 533 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 SATB1Q01826 763 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 SMAD4Q13485 552 aaKnown RBP11.73□□□□□ -0.53
TRIM40-205ENST00000307859 UBAP2LQ14157 1087 aaKnown RBP11.73□□□□□ -0.53
TRIM40-205ENST00000307859 ZNF234Q14588 700 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 CRY1Q16526 586 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 PFKFB4Q16877 469 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 GPRC6AQ5T6X5 926 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 FBXO39Q8N4B4 442 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 AFAP1L2Q8N4X5 818 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 CLDN19Q8N6F1 224 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 TMIEQ8NEW7 156 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 ST13P5Q8NFI4 369 aaPredicted RBP11.73□□□□□ -0.53
TRIM40-205ENST00000307859 OR8D1Q8WZ84 308 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 CHFRQ96EP1 664 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 OR52B2Q96RD2 323 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 COPS8Q99627 209 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 NUF2Q9BZD4 464 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 RASSF4Q9H2L5 321 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 SARS2Q9NP81 518 aaKnown RBP11.73□□□□□ -0.53
TRIM40-205ENST00000307859 TNFRSF12AQ9NP84 129 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 GTSE1Q9NYZ3 720 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 KLHL42Q9P2K6 505 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 TAGLN3Q9UI15 199 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 TMPRSS11EQ9UL52 423 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 CDYLQ9Y232 598 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 FAM186AA6NE01 2351 aa11.73□□□□□ -0.53
TRIM40-205ENST00000307859 TMEM233B4DJY2 109 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 PSMD11O00231 422 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 SDHDO14521 159 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 UBFD1O14562 309 aaKnown RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 TBX10O75333 385 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 SLC25A14O95258 325 aaPredicted RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 SIX3O95343 332 aaPredicted RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 JUNP05412 331 aaKnown RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 ESRRAP11474 423 aaPredicted RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 PSMC3P17980 439 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 XPAP23025 273 aaPredicted RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 ITGB7P26010 798 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 LTBRP36941 435 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 RGS4P49798 205 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 HK3P52790 923 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 INHBCP55103 352 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 ELF3P78545 371 aaPredicted RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 SIGLEC14Q08ET2 396 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 GRM2Q14416 872 aa11.72□□□□□ -0.53
TRIM40-205ENST00000307859 ELAVL3Q14576 367 aaKnown RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 HENMT1Q5T8I9 393 aaKnown RBP11.72□□□□□ -0.53
TRIM40-205ENST00000307859 NAIF1Q69YI7 327 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms