RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CLPTM1O96005 669 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 C8GP07360 202 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 GOT1P17174 413 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 GDI1P31150 447 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 MNDAP41218 407 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 MLLT1Q03111 559 aaPredicted RBP8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 ATAD1Q8NBU5 361 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 RNF145Q96MT1 663 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 SLC38A3Q99624 504 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 PCDHGA2Q9Y5H1 932 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 ATXN2Q99700 1313 aaKnown RBP8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 CAPN14A8MX76 684 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 SSNA1O43805 119 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 KCNJ13O60928 360 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 ITGA3P26006 1051 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 TAS2R41P59536 307 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 MSANTD1Q6ZTZ1 278 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 NYAP1Q6ZVC0 841 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 ZC3H7AQ8IWR0 971 aaKnown RBP8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 FAM98AQ8NCA5 519 aaKnown RBP8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 FATE1Q969F0 183 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 MYDGFQ969H8 173 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 TUBGCP5Q96RT8 1024 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 FUCA2Q9BTY2 467 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 STRADBQ9C0K7 418 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 KLQ9UEF7 1012 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 A0A0J9YVX5 310 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 A0A1W2PRG6 482 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 TMX2-CTNND1H3BSU7 103 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 MATN4O95460 622 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 PLGP00747 810 aaPredicted RBP8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 PKMP14618 531 aaKnown RBP8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 CMPK1P30085 196 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 GRIA4P48058 902 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 RASGEF1BQ0VAM2 473 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 SLC36A4Q6YBV0 504 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 ZNF852Q6ZMS4 543 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 BEND5Q7L4P6 421 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 CHST15Q7LFX5 561 aaPredicted RBP8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 STK32CQ86UX6 486 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 CCDC33Q8N5R6 958 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 FAM83DQ9H4H8 585 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 ERVK-11Q9UQG0 969 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 A0A087X0B3 334 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 C9J4A7 227 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 EPOP01588 193 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 PTPN5P54829 565 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 GYS2P54840 703 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 OTUD3Q5T2D3 398 aaPredicted RBP8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 CHRDL2Q6WN34 429 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 ZNF384Q8TF68 577 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 PEX13Q92968 403 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 MIEF2Q96C03 454 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 APOPT1Q96IL0 206 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 TM6SF2Q9BZW4 377 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 CDC42EP4Q9H3Q1 356 aaKnown RBP8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 hCG_1818297A0A087WSY0 165 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 H0YJX3 145 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 ZNF217O75362 1048 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 MAP3K6O95382 1288 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 TNFP01375 233 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 MGAT1P26572 445 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 TARSP26639 723 aaKnown RBP8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 HSD17B3P37058 310 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 SLC26A3P40879 764 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 PSMD8P48556 350 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 NOVP48745 357 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 HSDL2Q6YN16 418 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 MON1BQ7L1V2 547 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 AP2M1Q96CW1 435 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 SCLYQ96I15 445 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 C1orf74Q96LT6 269 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 ZNF641Q96N77 438 aaPredicted RBP8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 MMADHCQ9H3L0 296 aaPredicted RBP8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 L2HGDHQ9H9P8 463 aa8.26□□□□□ -1.09
PCDHB1-201ENST00000306549 OR5K4A6NMS3 321 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 LIN7AO14910 233 aaPredicted RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 DHX15O43143 795 aaKnown RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 RPP40O75818 363 aaKnown RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 PSMB4P28070 264 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 ATXN1P54253 815 aaKnown RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 SRP54P61011 504 aaKnown RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 XKR6Q5GH73 641 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 XPNPEP1Q9NQW7 623 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 DLGAP2Q9P1A6 1054 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 CDH7Q9ULB5 785 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 NAALADL1Q9UQQ1 740 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 ASF1AQ9Y294 204 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 GLYATL1P3A0A0U1RQE8 302 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 SRPRAP08240 638 aaKnown RBP8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 FAM58BPP0C7Q3 252 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 ALOX12P18054 663 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 DRD1P21728 446 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 ELK3P41970 407 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 DET1Q7L5Y6 550 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 GKN2Q86XP6 184 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 CCDC36Q8IYA8 594 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 SH3RF2Q8TEC5 729 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 WDR60Q8WVS4 1066 aa8.25□□□□□ -1.09
PCDHB1-201ENST00000306549 MCRS1Q96EZ8 462 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms