RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RPLP0P05388 317 aaKnown RBP13.29□□□□□ -0.28
TRIM56-201ENST00000306085 BDNFP23560 247 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 PPATQ06203 517 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 CHST13Q8NET6 341 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 OR5T2Q8NGG2 359 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 TAS1R2Q8TE23 839 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 FEM1AQ9BSK4 669 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 C2orf49Q9BVC5 232 aaPredicted RBP13.29□□□□□ -0.28
TRIM56-201ENST00000306085 TMEM39BQ9GZU3 492 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 COPS7AQ9UBW8 275 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 C1orf186Q6ZWK4 172 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 DNAJB7Q7Z6W7 309 aaPredicted RBP13.29□□□□□ -0.28
TRIM56-201ENST00000306085 MECRQ9BV79 373 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 TRAV19A0A0A6YYK7 116 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 LATS1O95835 1130 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 SHBGP04278 402 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 COL6A1P12109 1028 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 MAGEA8P43361 318 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 SLC43A3Q8NBI5 491 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 OR2T34Q8NGX1 318 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 OR2T3Q8NH03 318 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 ETNPPLQ8TBG4 499 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 NSMCE3Q96MG7 304 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 PRMT5O14744 637 aaPredicted RBP13.29□□□□□ -0.28
TRIM56-201ENST00000306085 INMTO95050 263 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 CPN2P22792 545 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 SCGB3A2Q96PL1 93 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 IMP3Q9NV31 184 aaKnown RBP13.29□□□□□ -0.28
TRIM56-201ENST00000306085 MTRRQ9UBK8 725 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF490Q9ULM2 529 aaPredicted RBP13.29□□□□□ -0.28
TRIM56-201ENST00000306085 KDM5CP41229 1560 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 MATN2O00339 956 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 EPHB6O15197 1021 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 NME6O75414 186 aaPredicted RBP13.29□□□□□ -0.28
TRIM56-201ENST00000306085 CABYRO75952 493 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 EPHA10Q5JZY3 1008 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 UNC5AQ6ZN44 842 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 PQLC1Q8N2U9 271 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 GAL3ST4Q96RP7 486 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 NXF3Q9H4D5 531 aaKnown RBP13.29□□□□□ -0.28
TRIM56-201ENST00000306085 ERVK-11Q9UQG0 969 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 TBX22Q9Y458 520 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 H3BSH0 61 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 AZIN1O14977 448 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 FCER2P06734 321 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 CTPS1P17812 591 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 TBX5Q99593 518 aa13.29□□□□□ -0.28
TRIM56-201ENST00000306085 HSPA12AO43301 675 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 BANF1O75531 89 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 GSTCDQ8NEC7 633 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 TM6SF2Q9BZW4 377 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 ZDHHC9Q9Y397 364 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 A0A0J9YYE9 177 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 HOXB8P17481 243 aaPredicted RBP13.28□□□□□ -0.28
TRIM56-201ENST00000306085 ANTXR2P58335 489 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 SERPINA13PQ6UXR4 307 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 PHYKPLQ8IUZ5 450 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 SPATA22Q8NHS9 363 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 CERS2Q96G23 380 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 HCN3Q9P1Z3 774 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 PCDH10Q9P2E7 1040 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 CAPN8A6NHC0 703 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 PIAS1O75925 651 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 SLC25A14O95258 325 aaPredicted RBP13.28□□□□□ -0.28
TRIM56-201ENST00000306085 CCNB1P14635 433 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 ITPKAP23677 461 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 SLC1A2P43004 574 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 CARD16Q5EG05 197 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 OR5T1Q8NG75 326 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 VNN3Q9NY84 501 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 PCDHB9Q9Y5E1 797 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 MUSKO15146 869 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 CLCN7P51798 805 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 BNIP1Q12981 228 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 GPR135Q8IZ08 494 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 EXOSC8Q96B26 276 aaKnown RBP13.28□□□□□ -0.28
TRIM56-201ENST00000306085 SPATA7Q9P0W8 599 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 UMODL1Q5DID0 1318 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 KCNJ13O60928 360 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 GNRH1P01148 92 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 YAP1P46937 504 aaKnown RBP13.28□□□□□ -0.28
TRIM56-201ENST00000306085 POLR2JP52435 117 aaKnown RBP13.28□□□□□ -0.28
TRIM56-201ENST00000306085 USP4Q13107 963 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 FIP1L1Q6UN15 594 aaKnown RBP13.28□□□□□ -0.28
TRIM56-201ENST00000306085 NPNTQ6UXI9 565 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 SLC30A10Q6XR72 485 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 LZTR1Q8N653 840 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 MFSD3Q96ES6 412 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 ADAM28Q9UKQ2 775 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 TLX3O43711 291 aaPredicted RBP13.28□□□□□ -0.28
TRIM56-201ENST00000306085 NT5EP21589 574 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 AARDQ4LEZ3 155 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 SH3D19Q5HYK7 790 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 OTUB2Q96DC9 234 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 IFT27Q9BW83 186 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 LYARQ9NX58 379 aaKnown RBP13.28□□□□□ -0.28
TRIM56-201ENST00000306085 CELF2O95319 508 aaKnown RBP13.28□□□□□ -0.28
TRIM56-201ENST00000306085 ZNF3P17036 446 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 CLCN5P51795 746 aa13.28□□□□□ -0.28
TRIM56-201ENST00000306085 ST3GAL4Q11206 333 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms