RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 NR4A3Q92570 626 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 HSD17B14Q9BPX1 270 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 DNAJB9Q9UBS3 223 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 OAS3Q9Y6K5 1087 aaKnown RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 PRMT3O60678 531 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 ITGA10O75578 1167 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 RSL1D1O76021 490 aaKnown RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 NPPAP01160 153 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 DOK6Q6PKX4 331 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 OR8H3Q8N146 312 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 P2RY11Q96G91 374 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF354BQ96LW1 612 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 CAMK1GQ96NX5 476 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 TCF25Q9BQ70 676 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 MND1Q9BWT6 205 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 ZNF282Q9UDV7 671 aaPredicted RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 DDTLA6NHG4 134 aaPredicted RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 WNT3AP56704 352 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 POU5F1Q01860 360 aaKnown RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 C9orf57Q5W0N0 161 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 SLC9A4Q6AI14 798 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 SAPCD2Q86UD0 394 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 PPTC7Q8NI37 304 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 GRIN3AQ8TCU5 1115 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 CSPG4P5Q96PW8 444 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 DNAAF2Q9NVR5 837 aaKnown RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 PEAK1Q9H792 1746 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 PRORSD1PA6NEY8 169 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 OR6C75A6NL08 312 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 KLF11O14901 512 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 PMM2O15305 246 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 TSPAN3O60637 253 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 LRATO95237 230 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 CD247P20963 164 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 GRM5P41594 1212 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 RBM34P42696 430 aaKnown RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 CTBP1Q13363 440 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 KCNK18Q7Z418 384 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 SAMD14Q8IZD0 417 aaPredicted RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 ZFAND2BQ8WV99 257 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 CXorf40BQ96DE9 158 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 SCGB3A2Q96PL1 93 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 ERVK-5Q9HDB9 667 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 FARSBQ9NSD9 589 aaKnown RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 EPHB6O15197 1021 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 MSCO60682 206 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 DNAJB5O75953 348 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 SAGP10523 405 aaPredicted RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 SPAM1P38567 509 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 ABL2P42684 1182 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 CCR10P46092 362 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 ABRQ12979 859 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 CA9Q16790 459 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 PAN2Q504Q3 1202 aaKnown RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 OMDQ99983 421 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 TMEM27Q9HBJ8 222 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 CCDC177Q9NQR7 707 aaPredicted RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 TMPRSS4Q9NRS4 437 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 ELFN1P0C7U0 828 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 GIMD1P0DJR0 217 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 KLRC2P26717 231 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 ACSL1P33121 698 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 HERVK_113P63132 956 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 KLHDC10Q6PID8 442 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 UBE2R2Q712K3 238 aaPredicted RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 XYLT1Q86Y38 959 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 AARSD1Q9BTE6 412 aaKnown RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 ERVK-6Q9BXR3 956 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 TRIM17Q9Y577 477 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 MRC1P22897 1456 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 PAGE1O75459 146 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 PRAMEF1O95521 474 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 YES1P07947 543 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 SLC5A3P53794 718 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 PPP3R1P63098 170 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 GRB14Q14449 540 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 IQCCQ4KMZ1 466 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 EIF5AL1Q6IS14 154 aaKnown RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 GALNT5Q7Z7M9 940 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 ZFPM1Q8IX07 1006 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 OXR1Q8N573 874 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 THRSPQ92748 146 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 CADM1Q9BY67 442 aaKnown RBP7.57□□□□□ -1.2
SF3B3-201ENST00000302516 EBF3Q9H4W6 596 aa7.57□□□□□ -1.2
SF3B3-201ENST00000302516 GLYATL1P3A0A0U1RQE8 302 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 A0A1W2PPM1 405 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 MANSC4A6NHS7 340 aaPredicted RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ANXA2P2A6NMY6 339 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 NDST3O95803 873 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 ANXA2P07355 339 aaKnown RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 GLUD2P49448 558 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 OR2B6P58173 313 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 RALGDSQ12967 914 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CXorf57Q6NSI4 855 aaKnown RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 PIGZQ86VD9 579 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 CLHC1Q8NHS4 586 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 DQX1Q8TE96 717 aaKnown RBP7.56□□□□□ -1.2
SF3B3-201ENST00000302516 COL26A1Q96A83 441 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 PPM1MQ96MI6 270 aa7.56□□□□□ -1.2
SF3B3-201ENST00000302516 SPON1Q9HCB6 807 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms