RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CCL22O00626 93 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 KMOO15229 486 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 CDK14O94921 469 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 C9P02748 559 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 ITIH1P19827 911 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 STIP1P31948 543 aaKnown RBP11.07□□□□□ -0.64
CLCC1-201ENST00000302500 EPHA4P54764 986 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 GPLD1P80108 840 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 CLN3Q13286 438 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 CCNG2Q16589 344 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 KCTD19Q17RG1 926 aaPredicted RBP11.07□□□□□ -0.64
CLCC1-201ENST00000302500 METRNLQ641Q3 311 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 WDR74Q6RFH5 385 aaPredicted RBP11.07□□□□□ -0.64
CLCC1-201ENST00000302500 CRTC3Q6UUV7 619 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 LSMEM2Q8N112 164 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 TRIM58Q8NG06 486 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 GPR150Q8NGU9 434 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 ZNF398Q8TD17 642 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 DNAJC1Q96KC8 554 aaKnown RBP11.07□□□□□ -0.64
CLCC1-201ENST00000302500 ZNF778Q96MU6 729 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 TMEM74Q96NL1 305 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 PPP1R2P1Q96PQ5 205 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 B3GNT4Q9C0J1 378 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 LRRC40Q9H9A6 602 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 ETNK1Q9HBU6 452 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 SLC40A1Q9NP59 571 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 CASS4Q9NQ75 786 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 KLC4Q9NSK0 619 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 SIDT1Q9NXL6 827 aaKnown RBP11.07□□□□□ -0.64
CLCC1-201ENST00000302500 CPNE7Q9UBL6 633 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 DNMT3AQ9Y6K1 912 aaPredicted RBP11.07□□□□□ -0.64
CLCC1-201ENST00000302500 AK5Q9Y6K8 562 aa11.07□□□□□ -0.64
CLCC1-201ENST00000302500 PIEZO2Q9H5I5 2752 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 GOLGA6L9A6NEM1 432 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 HGSO14964 777 aaPredicted RBP11.06□□□□□ -0.64
CLCC1-201ENST00000302500 NVLO15381 856 aaKnown RBP11.06□□□□□ -0.64
CLCC1-201ENST00000302500 ZSCAN5DPP0CG00 497 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 FGF3P11487 239 aaPredicted RBP11.06□□□□□ -0.64
CLCC1-201ENST00000302500 CCL4P13236 92 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 FOXN2P32314 431 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 RPL22P35268 128 aaKnown RBP11.06□□□□□ -0.64
CLCC1-201ENST00000302500 ACTN2P35609 894 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 CETN2P41208 172 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 MAGEA6P43360 314 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 PRLHRP49683 370 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 HHEXQ03014 270 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 ITGA9Q13797 1035 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 RPS6KA1Q15418 735 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 LDLRAP1Q5SW96 308 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 CCDC181Q5TID7 509 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 CCDC70Q6NSX1 233 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 TTC27Q6P3X3 843 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 TMEM71Q6P5X7 295 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 C19orf48Q6RUI8 117 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 USP53Q70EK8 1073 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 RAB11FIP2Q7L804 512 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 NXPE1Q8N323 547 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 LILRA3Q8N6C8 439 aaPredicted RBP11.06□□□□□ -0.64
CLCC1-201ENST00000302500 BEND7Q8N7W2 519 aaPredicted RBP11.06□□□□□ -0.64
CLCC1-201ENST00000302500 CDKN2AIPNLQ96HQ2 116 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 SGSM3Q96HU1 749 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 CCDC74BQ96LY2 380 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 RANBP9Q96S59 729 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 TBC1D10AQ9BXI6 508 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 PIH1D1Q9NWS0 290 aaKnown RBP11.06□□□□□ -0.64
CLCC1-201ENST00000302500 FOXJ2Q9P0K8 574 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 RIMKLBQ9ULI2 386 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 TTC7AQ9ULT0 858 aaPredicted RBP11.06□□□□□ -0.64
CLCC1-201ENST00000302500 DRG1Q9Y295 367 aaKnown RBP11.06□□□□□ -0.64
CLCC1-201ENST00000302500 ZKSCAN5Q9Y2L8 839 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 PCDHGA3Q9Y5H0 932 aa11.06□□□□□ -0.64
CLCC1-201ENST00000302500 FASNP49327 2511 aaKnown RBP11.05□□□□□ -0.64
CLCC1-201ENST00000302500 TLN1Q9Y490 2541 aaKnown RBP11.05□□□□□ -0.64
CLCC1-201ENST00000302500 TRBV23OR9-2A0A075B6M9 112 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 OR5K4A6NMS3 321 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 OR52A4PA6NMU1 304 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 C2orf81A6NN90 581 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 ERI2A8K979 691 aaKnown RBP11.05□□□□□ -0.64
CLCC1-201ENST00000302500 STX7O15400 261 aaKnown RBP11.05□□□□□ -0.64
CLCC1-201ENST00000302500 KCNJ13O60928 360 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 POP7O75817 140 aaKnown RBP11.05□□□□□ -0.64
CLCC1-201ENST00000302500 TNFSF15O95150 251 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 ANKRD34CP0C6C1 535 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 TPH1P17752 444 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 ARNTP27540 789 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 PCBP4P57723 403 aaKnown RBP11.05□□□□□ -0.64
CLCC1-201ENST00000302500 TRA2AQ13595 282 aaKnown RBP eCLIP11.05□□□□□ -0.648e-6■□□□□ 8.1
CLCC1-201ENST00000302500 NFE2L1Q14494 772 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 CYP1B1Q16678 543 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 PLA2G4EQ3MJ16 856 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 CAPRIN2Q6IMN6 1127 aaKnown RBP11.05□□□□□ -0.64
CLCC1-201ENST00000302500 ARHGEF18Q6ZSZ5 1173 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 SNX20Q7Z614 316 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 RCBTB1Q8NDN9 531 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 ZNF248Q8NDW4 579 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 OR52K1Q8NGK4 314 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 OR2L2Q8NH16 312 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 HNRNPLLQ8WVV9 542 aaKnown RBP11.05□□□□□ -0.64
CLCC1-201ENST00000302500 TMEM159Q96B96 161 aa11.05□□□□□ -0.64
CLCC1-201ENST00000302500 SGF29Q96ES7 293 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms