RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 DCDC1P59894 354 aa22■■□□□ 1.11
SMAD1-201ENST00000302085 PARM1Q6UWI2 310 aa22■■□□□ 1.11
SMAD1-201ENST00000302085 TECPR1Q7Z6L1 1165 aa22■■□□□ 1.11
SMAD1-201ENST00000302085 TMIEQ8NEW7 156 aa22■■□□□ 1.11
SMAD1-201ENST00000302085 SPATS2LQ9NUQ6 558 aaKnown RBP22■■□□□ 1.11
SMAD1-201ENST00000302085 MUC22E2RYF6 1773 aaPredicted RBP22■■□□□ 1.11
SMAD1-201ENST00000302085 CDH23Q9H251 3354 aa22■■□□□ 1.11
SMAD1-201ENST00000302085 RPS17P08708 135 aaKnown RBP21.99■■□□□ 1.11
SMAD1-201ENST00000302085 LAMP2P13473 410 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 PSMC3P17980 439 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 DGKAP23743 735 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 DLX2Q07687 328 aaPredicted RBP21.99■■□□□ 1.11
SMAD1-201ENST00000302085 GRIN2CQ14957 1233 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 CYHR1Q6ZMK1 362 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 TEX9Q8N6V9 391 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 DTX3LQ8TDB6 740 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 TRPC4APQ8TEL6 797 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 ARRDC3Q96B67 414 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 ASB2Q96Q27 587 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 RPP25Q9BUL9 199 aaKnown RBP21.99■■□□□ 1.11
SMAD1-201ENST00000302085 C1QTNF3Q9BXJ4 246 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 CD274Q9NZQ7 290 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 ITM2BQ9Y287 266 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 SPECC1L-ADORA2AF8WAN1 911 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 GYG2O15488 501 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 GSC2O15499 205 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 SKAP2O75563 359 aaPredicted RBP21.99■■□□□ 1.11
SMAD1-201ENST00000302085 RGS4P49798 205 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 CLCQ05315 142 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 TGFBIQ15582 683 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 UGT3A2Q3SY77 523 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 ANKS6Q68DC2 871 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 CLEC6AQ6EIG7 209 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 ERAP2Q6P179 960 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 TXNDC11Q6PKC3 985 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 SBSNQ6UWP8 590 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 LIPIQ6XZB0 460 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 PIP4K2CQ8TBX8 421 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 OR8D1Q8WZ84 308 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 FGF14Q92915 247 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 ELSPBP1Q96BH3 223 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 RIOK2Q9BVS4 552 aaKnown RBP21.99■■□□□ 1.11
SMAD1-201ENST00000302085 MEAF6Q9HAF1 191 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 MID1IP1Q9NPA3 183 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 SMOXQ9NWM0 555 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 TMCO1Q9UM00 188 aa21.99■■□□□ 1.11
SMAD1-201ENST00000302085 KIAA1549LQ6ZVL6 1849 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 SPINT1O43278 529 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 FGF4P08620 206 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 KLF10Q13118 480 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 TMEM198Q66K66 360 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 NXNQ6DKJ4 435 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 CES5AQ6NT32 575 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 AFAP1L2Q8N4X5 818 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 UTP6Q9NYH9 597 aaKnown RBP21.98■■□□□ 1.11
SMAD1-201ENST00000302085 G3BP2Q9UN86 482 aaKnown RBP21.98■■□□□ 1.11
SMAD1-201ENST00000302085 TCF20Q9UGU0 1960 aaKnown RBP21.98■■□□□ 1.11
SMAD1-201ENST00000302085 RGSL1A5PLK6 1076 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 A8MUI8 341 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 GM2AP17900 193 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 NAA25Q14CX7 972 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 HENMT1Q5T8I9 393 aaKnown RBP21.98■■□□□ 1.11
SMAD1-201ENST00000302085 SERPINA13PQ6UXR4 307 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 CLYBLQ8N0X4 340 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 MYO1HQ8N1T3 1032 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 TRAM1L1Q8N609 369 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 CPSF7Q8N684 471 aaKnown RBP21.98■■□□□ 1.11
SMAD1-201ENST00000302085 POU5F2Q8N7G0 328 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 ZNF483Q8TF39 744 aaPredicted RBP21.98■■□□□ 1.11
SMAD1-201ENST00000302085 ZNF385DQ9H6B1 395 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 ZDHHC4Q9NPG8 344 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 RAD18Q9NS91 495 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 NUDT4Q9NZJ9 180 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 THAP10Q9P2Z0 257 aaPredicted RBP21.98■■□□□ 1.11
SMAD1-201ENST00000302085 NFKBIL1Q9UBC1 381 aaPredicted RBP21.98■■□□□ 1.11
SMAD1-201ENST00000302085 ADAMTS6Q9UKP5 1117 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 ASB1Q9Y576 335 aa21.98■■□□□ 1.11
SMAD1-201ENST00000302085 PIKFYVEQ9Y2I7 2098 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 A0A1B0GTL3 188 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 SNX2O60749 519 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 KAT7O95251 611 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 ITGB7P26010 798 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 GDI1P31150 447 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 CCR7P32248 378 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 IL12RB1P42701 662 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 INHBCP55103 352 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 SATB1Q01826 763 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 ELAVL3Q14576 367 aaKnown RBP21.97■■□□□ 1.11
SMAD1-201ENST00000302085 DET1Q7L5Y6 550 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 ADAMTSL2Q86TH1 951 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 PARP9Q8IXQ6 854 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 RBM15BQ8NDT2 890 aaKnown RBP21.97■■□□□ 1.11
SMAD1-201ENST00000302085 UCMAQ8WVF2 138 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 ESAMQ96AP7 390 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 PANX3Q96QZ0 392 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 ACOX2Q99424 681 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 SEMA4BQ9NPR2 832 aaPredicted RBP21.97■■□□□ 1.11
SMAD1-201ENST00000302085 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.97■■□□□ 1.11
SMAD1-201ENST00000302085 KCTD5Q9NXV2 234 aa21.97■■□□□ 1.11
SMAD1-201ENST00000302085 KLHL42Q9P2K6 505 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms