RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 GRIN2DO15399 1336 aa13.46□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ARHGEF33A8MVX0 844 aa13.46□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GCATO75600 419 aa13.46□□□□□ -0.26
CHRFAM7A-201ENST00000299847 OR4F21O95013 312 aa13.46□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ANXA4P09525 319 aaPredicted RBP13.46□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ARFIP1P53367 373 aa13.46□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ARL14EPQ8N8R7 260 aaPredicted RBP13.46□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FAM163AQ96GL9 167 aaPredicted RBP13.46□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CDK15Q96Q40 435 aa13.46□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SAMD4AQ9UPU9 718 aaKnown RBP13.46□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SHOX2O60902 331 aaPredicted RBP13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 VIPP01282 170 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GNPDA1P46926 289 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 BRMS1LQ5PSV4 323 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 RGMBQ6NW40 437 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MON1BQ7L1V2 547 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 BEND5Q7L4P6 421 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CHERPQ8IWX8 916 aaKnown RBP13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ZNF567Q8N184 647 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PLD5Q8N7P1 536 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 POLE3Q9NRF9 147 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 A0A1W2PRG6 482 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 UGT2B11O75310 529 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ADRA1BP35368 520 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 LIPEQ05469 1076 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 HKDC1Q2TB90 917 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FBXO42Q6P3S6 717 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ZNF613Q6PF04 617 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 POTEHQ6S545 545 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 AKAP14Q86UN6 197 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ATCAYQ86WG3 371 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MREGQ8N565 214 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PADI3Q9ULW8 664 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GNEQ9Y223 722 aaKnown RBP13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 E7ENX8 843 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 XKRYO14609 159 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TSPAN1O60635 241 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 RGS20O76081 388 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ZNF432O94892 652 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FOSL2P15408 326 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 OLFML1Q6UWY5 402 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 RTL4Q6ZR62 310 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CPA6Q8N4T0 437 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MEIOBQ8N635 442 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 OR2T34Q8NGX1 318 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 OR2T3Q8NH03 318 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CD99L2Q8TCZ2 262 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 C11orf24Q96F05 449 aaPredicted RBP13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PHF24Q9UPV7 400 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 LRRC72A6NJI9 287 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 QSOX1O00391 747 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 HCN1O60741 890 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CILPO75339 1184 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CLDN9O95484 217 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PRKCHP24723 683 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 RPIAP49247 311 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CDH12P55289 794 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CLCQ05315 142 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CACNG1Q06432 222 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 UBAP2Q5T6F2 1119 aaKnown RBP13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CRYBG2Q8N1P7 616 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PCED1BQ96HM7 432 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TEFMQ96QE5 360 aaKnown RBP13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CHCHD6Q9BRQ6 235 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ELAC1Q9H777 363 aaKnown RBP13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TRNAU1APQ9NX07 287 aaKnown RBP13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 IQGAP1P46940 1657 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 FAM172BPA6NC97 362 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ARL5CA6NH57 179 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 H3BSH0 61 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PIP5K1BO14986 540 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 NR2F6P10588 404 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GNALP38405 381 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SLC51AQ86UW1 340 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SERPINA9Q86WD7 417 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ZNF570Q96NI8 536 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 YIPF4Q9BSR8 244 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 C1QTNF1Q9BXJ1 281 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MAPRE3Q9UPY8 281 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DMTF1Q9Y222 760 aa13.45□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ZNF879B4DU55 563 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CCNDBP1O95273 360 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 TSHRP16473 764 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 CDH3P22223 829 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GDF10P55107 478 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 GANABQ14697 944 aaKnown RBP13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ZYG11AQ6WRX3 759 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SLC26A9Q7LBE3 791 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ECHDC2Q86YB7 292 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 OXCT2Q9BYC2 517 aaPredicted RBP13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 DUS2Q9NX74 493 aaKnown RBP13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 PRPF19Q9UMS4 504 aaKnown RBP13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SH3D21A4FU49 640 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 H3BNH8 94 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 SEMA3DO95025 777 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 LCA5LO95447 670 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 C5orf22Q49AR2 442 aa13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 ARL13AQ5H913 290 aaPredicted RBP13.44□□□□□ -0.26
CHRFAM7A-201ENST00000299847 MSANTD2Q6P1R3 559 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms