RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 HS3ST5Q8IZT8 346 aa13.38□□□□□ -0.27
RPUSD4-201ENST00000298317 GABPB2Q8TAK5 448 aaPredicted RBP13.38□□□□□ -0.27
RPUSD4-201ENST00000298317 SUN5Q8TC36 379 aa13.38□□□□□ -0.27
RPUSD4-201ENST00000298317 MCOLN3Q8TDD5 553 aa13.38□□□□□ -0.27
RPUSD4-201ENST00000298317 NSUN5Q96P11 429 aaKnown RBP13.38□□□□□ -0.27
RPUSD4-201ENST00000298317 GLOD4Q9HC38 313 aa13.38□□□□□ -0.27
RPUSD4-201ENST00000298317 ENTPD7Q9NQZ7 604 aa13.38□□□□□ -0.27
RPUSD4-201ENST00000298317 COMMD8Q9NX08 183 aa13.38□□□□□ -0.27
RPUSD4-201ENST00000298317 SATB2Q9UPW6 733 aa13.38□□□□□ -0.27
RPUSD4-201ENST00000298317 PCDHGA10Q9Y5H3 936 aa13.38□□□□□ -0.27
RPUSD4-201ENST00000298317 RALGAPA2Q2PPJ7 1873 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 ZNF236Q9UL36 1845 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 TBKBP1A7MCY6 615 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 SYCE1LA8MT33 242 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 XPNPEP2O43895 674 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 TSPAN1O60635 241 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 SLC22A3O75751 556 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 CNTN5O94779 1100 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 CD1DP15813 335 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 GGT1P19440 569 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 FSHRP23945 695 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 CASP2P42575 452 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 POLR2JP52435 117 aaKnown RBP13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 CDK5R2Q13319 367 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 SELPLGQ14242 412 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 ZBTB6Q15916 424 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 VARS2Q5ST30 1063 aaKnown RBP13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 ANKRD34AQ69YU3 496 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 IL31Q6EBC2 164 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 TUBA3EQ6PEY2 450 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 AGBL3Q8NEM8 1001 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 EXT2Q93063 718 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 DUSP16Q9BY84 665 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 FAM49AQ9H0Q0 323 aaPredicted RBP13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 AS3MTQ9HBK9 375 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 CNGB3Q9NQW8 809 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 SMPD4Q9NXE4 827 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 C3orf18Q9UK00 162 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 SNX10Q9Y5X0 201 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 GRXCR2A6NFK2 248 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 TAF4O00268 1085 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 TNPO2O14787 897 aaKnown RBP13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 SLC16A6O15403 523 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 SCO2O43819 266 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 MTRF1O75570 445 aaKnown RBP13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 BEST1O76090 585 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 DLGAP3O95886 979 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 SPNP16150 400 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 SLC26A2P50443 739 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 GEMP55040 296 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 COPZ1P61923 177 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 FPGSQ05932 587 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 VAC14Q08AM6 782 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 RNF19BQ6ZMZ0 732 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 ARHGAP36Q6ZRI8 547 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 PRR23BQ6ZRT6 265 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 TAS2R42Q7RTR8 314 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 PIM3Q86V86 326 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 RALGPS2Q86X27 583 aaPredicted RBP13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 CILP2Q8IUL8 1156 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 DPP10Q8N608 796 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 FAM86B1Q8N7N1 296 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 POC5Q8NA72 575 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 SH3RF2Q8TEC5 729 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 KCTD13Q8WZ19 329 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 C17orf80Q9BSJ5 609 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 OR2B2Q9GZK3 357 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 ERVK-18Q9QC07 812 aa13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 EIF3LQ9Y262 564 aaKnown RBP13.37□□□□□ -0.27
RPUSD4-201ENST00000298317 A0A1B0GTL3 188 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 HOXC11O43248 304 aaPredicted RBP13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 MTHFD2P13995 350 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 IL12AP29459 219 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 GRIK1P39086 918 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 MAP2K4P45985 399 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 ZNF135P52742 658 aaPredicted RBP13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 NKG7Q16617 165 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 TRIM71Q2Q1W2 868 aaKnown RBP13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 CELF3Q5SZQ8 465 aaKnown RBP13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 C9orf57Q5W0N0 161 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 DESI1Q6ICB0 168 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 RANBP10Q6VN20 620 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 RAB44Q7Z6P3 723 aaPredicted RBP13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 PNPLA1Q8N8W4 532 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 CNIH3Q8TBE1 160 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 C18orf25Q96B23 403 aaPredicted RBP13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 CCDC115Q96NT0 180 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 UGT2B28Q9BY64 529 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 EXD2Q9NVH0 621 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 FAM234BA2RU67 622 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 TBX1O43435 398 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 ANGPTL1O95841 491 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 CST1P01037 141 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 NPR3P17342 541 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 JUNDP17535 347 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 CCNCP24863 283 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 MASP1P48740 699 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 SLC35A2P78381 396 aa13.36□□□□□ -0.27
RPUSD4-201ENST00000298317 CLCA4Q14CN2 919 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms