RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 DENND1CQ8IV53 801 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 COLGALT2Q8IYK4 626 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 HS3ST5Q8IZT8 346 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 BHMTQ93088 406 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 SEZ6LQ9BYH1 1024 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 LEF1Q9UJU2 399 aaPredicted RBP24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 PRAMEF12O95522 483 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 PRR35P0CG20 571 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 PKMP14618 531 aaKnown RBP24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 NFKBIAP25963 317 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 CAPGP40121 348 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 ELMSAN1Q6PJG2 1045 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 ABRAXAS1Q6UWZ7 409 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 METTL6Q8TCB7 284 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 NACA2Q9H009 215 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 SPC25Q9HBM1 224 aa24.12■■□□□ 1.45
SPTSSA-201ENST00000298130 E5RI56 91 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 E2F3O00716 465 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 EEDO75530 441 aaKnown RBP24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 GJB5O95377 273 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 GPIP06744 558 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 XKR7Q5GH72 579 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 DTWD1Q8N5C7 304 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 PACRGLQ8N7B6 248 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 CD200R1Q8TD46 325 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 FAM193BQ96PV7 902 aaPredicted RBP24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 GKN1Q9NS71 199 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 UBA2Q9UBT2 640 aaPredicted RBP24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 GREB1Q4ZG55 1949 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 H3BMQ9 156 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 ATP6AP1LQ52LC2 224 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 AARS2Q5JTZ9 985 aaKnown RBP24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 AFTPHQ6ULP2 937 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 LRRC43Q8N309 656 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 LINC01599Q8WXQ3 324 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 COG8Q96MW5 612 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 SCUBE2Q9NQ36 999 aa24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 POLR3HQ9Y535 204 aaPredicted RBP24.11■■□□□ 1.45
SPTSSA-201ENST00000298130 FFAR3O14843 346 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 GPR42O15529 346 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 VPS26AO75436 327 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 IRF1P10914 325 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 NR4A1P22736 598 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 PIGFQ07326 219 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 SPATA19Q7Z5L4 167 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 TNIP2Q8NFZ5 429 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 CARS2Q9HA77 564 aaKnown RBP24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 POPDC3Q9HBV1 291 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 INTS10Q9NVR2 710 aaKnown RBP24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 C2orf81A6NN90 581 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 INSIG1O15503 277 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 CYBAP13498 195 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 CCND3P30281 292 aaPredicted RBP24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 GDF5P43026 501 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 YBEYP58557 167 aaPredicted RBP24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 ERVK-8P63133 956 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 NR6A1Q15406 480 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 TGFBIQ15582 683 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 RFTN2Q52LD8 501 aaPredicted RBP24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 OGFOD2Q6N063 350 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 OR56A4Q8NGH8 313 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 DNAAF2Q9NVR5 837 aaKnown RBP24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 RAI2Q9Y5P3 530 aa24.1■■□□□ 1.45
SPTSSA-201ENST00000298130 SYCE1LA8MT33 242 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 VNN2O95498 520 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 EPOP01588 193 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 SHMT2P34897 504 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 IL2P60568 153 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 BNIP3Q12983 259 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 PTGR1Q14914 329 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 SGO1Q5FBB7 561 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 STK32CQ86UX6 486 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 OR10Q1Q8NGQ4 319 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 FBXO30Q8TB52 745 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 MIPOL1Q8TD10 442 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 FIG4Q92562 907 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 FATE1Q969F0 183 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 NSMCE2Q96MF7 247 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 MGME1Q9BQP7 344 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 TBCDQ9BTW9 1192 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 ACTL8Q9H568 366 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 NTN4Q9HB63 628 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 H0Y858 1186 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 CTPS1P17812 591 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 OXCT1P55809 520 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 DSC1Q08554 894 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 MBTPS1Q14703 1052 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 OR6K2Q8NGY2 324 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 FUBP3Q96I24 572 aaKnown RBP eCLIP24.09■■□□□ 1.457e-12■■□□□ 14.1
SPTSSA-201ENST00000298130 OSBPL6Q9BZF3 934 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 TLR9Q9NR96 1032 aa24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 IFT80Q9P2H3 777 aaPredicted RBP24.09■■□□□ 1.45
SPTSSA-201ENST00000298130 SNAP91O60641 907 aa24.08■■□□□ 1.45
SPTSSA-201ENST00000298130 CA5AP35218 305 aa24.08■■□□□ 1.45
SPTSSA-201ENST00000298130 PATL1Q86TB9 770 aaKnown RBP24.08■■□□□ 1.45
SPTSSA-201ENST00000298130 THAP11Q96EK4 314 aa24.08■■□□□ 1.45
SPTSSA-201ENST00000298130 SEPT3Q9UH03 358 aa24.08■■□□□ 1.45
SPTSSA-201ENST00000298130 NOBOXO60393 691 aa24.08■■□□□ 1.45
SPTSSA-201ENST00000298130 ABRAXAS2Q15018 415 aa24.08■■□□□ 1.45
SPTSSA-201ENST00000298130 PTRH1Q86Y79 214 aaKnown RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms