RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 EPS8Q12929 822 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 TOP3AQ13472 1001 aaPredicted RBP6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 GCNT6Q5T4J0 391 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 SULT1C3Q6IMI6 304 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 TCEAL6Q6IPX3 200 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 NUP54Q7Z3B4 507 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 C10orf107Q8IVU9 208 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 PYROXD2Q8N2H3 581 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 DDHD1Q8NEL9 900 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 TRNT1Q96Q11 434 aaKnown RBP6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 HIST1H2AAQ96QV6 131 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 SPAG4Q9NPE6 437 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 CYP8B1Q9UNU6 501 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 GMPPBQ9Y5P6 360 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 SESN1Q9Y6P5 492 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 IGLV3-22A0A075B6J6 115 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 DCLK1O15075 740 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 PI15O43692 258 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 RBMXL2O75526 392 aaKnown RBP6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 WFS1O76024 890 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 AP2A1O95782 977 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 TYRP14679 529 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 MYL9P24844 172 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 HSPA7P48741 367 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 CASP6P55212 293 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 SEMG2Q02383 582 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 TRIM25Q14258 630 aaKnown RBP6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 ARHGAP40Q5TG30 622 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 ARCQ7LC44 396 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 SLC29A4Q7RTT9 530 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 LDB1Q86U70 411 aaPredicted RBP6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 CUZD1Q86UP6 607 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 LRRTM4Q86VH4 590 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 SAMD14Q8IZD0 417 aaPredicted RBP6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 SIDT2Q8NBJ9 832 aaKnown RBP6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 ZMIZ2Q8NF64 920 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 SPATA22Q8NHS9 363 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 NCSTNQ92542 709 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 BAP1Q92560 729 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 DGAT2Q96PD7 388 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 RIOK2Q9BVS4 552 aaKnown RBP6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 ST6GALNAC4Q9H4F1 302 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 CCSER2Q9H7U1 834 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 IPPKQ9H8X2 491 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 COPG2Q9UBF2 871 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 MAP4K5Q9Y4K4 846 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 BIRC5O15392 142 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 TBX18O95935 607 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 VIPR1P32241 457 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 GRIA3P42263 894 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 GATMP50440 423 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 CLCN7P51798 805 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 ARFIP1P53367 373 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 CYP4F3Q08477 520 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 HSPB3Q12988 150 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 CHIT1Q13231 466 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 PLEKHA7Q6IQ23 1121 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 SLC8B1Q6J4K2 584 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 TMEM126BQ8IUX1 230 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 RASGEF1AQ8N9B8 481 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 TRPV3Q8NET8 790 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 STK32AQ8WU08 396 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 PIGKQ92643 395 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 HAPLN3Q96S86 360 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 NOL11Q9H8H0 719 aaKnown RBP6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 CALML5Q9NZT1 146 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 TRAF6Q9Y4K3 522 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 IQCMA0A1B0GVH7 501 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 LEFTY2O00292 366 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 NOL4O94818 638 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 CST1P01037 141 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 PRKCGP05129 697 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 FGFR3P22607 806 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 PTGER3P43115 390 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 ZCCHC12Q6PEW1 402 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 SLC39A5Q6ZMH5 540 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 TMEM156Q8N614 296 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 COX18Q8N8Q8 333 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 PIK3C3Q8NEB9 887 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 TTLQ8NG68 377 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 DLG3Q92796 817 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 ART4Q93070 314 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 TMEM125Q96AQ2 219 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 PCDHB18PQ96TA0 734 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 TXNRD2Q9NNW7 524 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 SERINC1Q9NRX5 453 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 C19orf25Q9UFG5 118 aaPredicted RBP6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 OGDHLQ9ULD0 1010 aa6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 SAMHD1Q9Y3Z3 626 aaKnown RBP6.85□□□□□ -1.31
GAPVD1-202ENST00000297933 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 FAM237BA0A1B0GVD1 139 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ATP6AP2A0A1C7CYW4 349 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 A6NCN8 305 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 YJEFN3A6XGL0 299 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 E7ENQ6 273 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 DHX15O43143 795 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CLEC3AO75596 197 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 ATP6AP2O75787 350 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 COX4I1P13073 169 aa6.84□□□□□ -1.31
GAPVD1-202ENST00000297933 CCR8P51685 355 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms