RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 CEACAM5P06731 702 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 ZNF7P17097 686 aaPredicted RBP14.95□□□□□ -0.02
CCDC140-201ENST00000295226 CD38P28907 300 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 RACK1P63244 317 aaKnown RBP14.95□□□□□ -0.02
CCDC140-201ENST00000295226 ITIH4Q14624 930 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 NFATC4Q14934 902 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 ZNF542PQ5EBM4 170 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 GRTP1Q5TC63 336 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 TMEM220Q6QAJ8 160 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 CRTC3Q6UUV7 619 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 KYAT3Q6YP21 454 aaKnown RBP14.95□□□□□ -0.02
CCDC140-201ENST00000295226 PRSS33Q8NF86 280 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 GABPB2Q8TAK5 448 aaPredicted RBP14.95□□□□□ -0.02
CCDC140-201ENST00000295226 LKAAEAR1Q8TD35 194 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 PIGKQ92643 395 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 TSACCQ96A04 125 aaPredicted RBP14.95□□□□□ -0.02
CCDC140-201ENST00000295226 VPS39Q96JC1 886 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 ZC3H10Q96K80 434 aaKnown RBP14.95□□□□□ -0.02
CCDC140-201ENST00000295226 RBBP8Q99708 897 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 CLPBQ9H078 707 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 CAB39LQ9H9S4 337 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 PPCSQ9HAB8 311 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 FGF22Q9HCT0 170 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 TM7SF3Q9NS93 570 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 GALPQ9UBC7 116 aa14.95□□□□□ -0.02
CCDC140-201ENST00000295226 EBAG9O00559 213 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 NIPSNAP2O75323 286 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 RHOBTB1O94844 696 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 GMPRP36959 345 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 PPARGP37231 505 aaPredicted RBP14.94□□□□□ -0.02
CCDC140-201ENST00000295226 NSG1P42857 185 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 RABIFP47224 123 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 THOP1P52888 689 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 CDKN2DP55273 166 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 TCF15Q12870 199 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 NAB1Q13506 487 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 PLA2G4EQ3MJ16 856 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 TNFAIP8L3Q5GJ75 292 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 PRAMEF14Q5SWL7 426 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 RNF187Q5TA31 235 aaPredicted RBP14.94□□□□□ -0.02
CCDC140-201ENST00000295226 PTRHD1Q6GMV3 140 aaKnown RBP14.94□□□□□ -0.02
CCDC140-201ENST00000295226 ADGRD1Q6QNK2 874 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 RD3Q7Z3Z2 195 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 C11orf74Q86VG3 221 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 RIBC1Q8N443 379 aaPredicted RBP14.94□□□□□ -0.02
CCDC140-201ENST00000295226 OR1E3Q8WZA6 343 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 ELMO2Q96JJ3 720 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 RHOJQ9H4E5 214 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 FSCN3Q9NQT6 498 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 NSMCE4AQ9NXX6 385 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 FAM8A1Q9UBU6 413 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 PI4KAP42356 2102 aa14.94□□□□□ -0.02
CCDC140-201ENST00000295226 TDRD6O60522 2096 aaKnown RBP14.94□□□□□ -0.02
CCDC140-201ENST00000295226 TNRC6BQ9UPQ9 1833 aaKnown RBP14.94□□□□□ -0.02
CCDC140-201ENST00000295226 FAM95CA0A1B0GW59 222 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 CFAP99D6REC4 459 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 NDUFAB1O14561 156 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 PFDN6O15212 129 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 TRIM16O95361 564 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 ITGA2BP08514 1039 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 RALBP11234 206 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 PKMP14618 531 aaKnown RBP14.93□□□□□ -0.02
CCDC140-201ENST00000295226 PBLDP30039 288 aaPredicted RBP14.93□□□□□ -0.02
CCDC140-201ENST00000295226 SPRP35270 261 aaPredicted RBP14.93□□□□□ -0.02
CCDC140-201ENST00000295226 LIMK2P53671 638 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 CSE1LP55060 971 aaKnown RBP14.93□□□□□ -0.02
CCDC140-201ENST00000295226 KIAA1024LP59773 190 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 YPEL5P62699 121 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 TIAL1Q01085 375 aaKnown RBP eCLIP14.93□□□□□ -0.02
CCDC140-201ENST00000295226 GUCY1A3Q02108 690 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 ZNF460Q14592 562 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 TMED2Q15363 201 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 CCDC6Q16204 474 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 PIM3Q86V86 326 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 ZNF547Q8IVP9 402 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 DCLK2Q8N568 766 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 MFSD2AQ8NA29 543 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 OLFM1Q99784 485 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 AARSD1Q9BTE6 412 aaKnown RBP14.93□□□□□ -0.02
CCDC140-201ENST00000295226 CYP4F12Q9HCS2 524 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 SARS2Q9NP81 518 aaKnown RBP14.93□□□□□ -0.02
CCDC140-201ENST00000295226 ZNHIT2Q9UHR6 403 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 SLC24A2Q9UI40 661 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 PILRBQ9UKJ0 227 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 SLC39A10Q9ULF5 831 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 SUFUQ9UMX1 484 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 MED16Q9Y2X0 877 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 PLEKHM1Q9Y4G2 1056 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 FANCMQ8IYD8 2048 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 A0A1B0GVT2 93 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 TLR4O00206 839 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 DNAJC6O75061 913 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 HOXC4P09017 264 aaPredicted RBP14.93□□□□□ -0.02
CCDC140-201ENST00000295226 NUBP1P53384 320 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 FZD2Q14332 565 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 HECTD2Q5U5R9 776 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 GALNT7Q86SF2 657 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 TRAPPC5Q8IUR0 188 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 OR56A4Q8NGH8 313 aa14.93□□□□□ -0.02
CCDC140-201ENST00000295226 PDXPQ96GD0 296 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms