RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 MAIP1Q8WWC4 291 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 SLCO2A1Q92959 643 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 LINC00615Q96LM1 132 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-201ENST00000288344 CNTNAP3BQ96NU0 1288 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 OR2M4Q96R27 311 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 FSD1LQ9BXM9 530 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 CNTNAP3Q9BZ76 1288 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 OR2AG1Q9H205 316 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 WASH6PQ9NQA3 447 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 RAB6BQ9NRW1 208 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 HOMER3Q9NSC5 361 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 PAK5Q9P286 719 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 PDP2Q9P2J9 529 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 GPR34Q9UPC5 381 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 PRKAB1Q9Y478 270 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 DNMT3AQ9Y6K1 912 aaPredicted RBP9.04□□□□□ -0.96
HMGN1-201ENST00000288344 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.04□□□□□ -0.96
HMGN1-201ENST00000288344 RNF215Q9Y6U7 377 aa9.04□□□□□ -0.96
HMGN1-201ENST00000288344 FAM149AA5PLN7 773 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 TRABD2BA6NFA1 517 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 C2orf81A6NN90 581 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 STX7O15400 261 aaKnown RBP9.03□□□□□ -0.96
HMGN1-201ENST00000288344 ECEL1O95672 775 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 MT-CO3P00414 261 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 PROS1P07225 676 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 PRSS56P0CW18 603 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 ARNTP27540 789 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 CD1CP29017 333 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 MAGEA3P43357 314 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 DUSP3P51452 185 aaPredicted RBP9.03□□□□□ -0.96
HMGN1-201ENST00000288344 UBE2IP63279 158 aaKnown RBP9.03□□□□□ -0.96
HMGN1-201ENST00000288344 HES3Q5TGS1 186 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 DOK6Q6PKX4 331 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 FAM151BQ6UXP7 276 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 LINC00523Q86TU6 105 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 CAND1Q86VP6 1230 aaKnown RBP9.03□□□□□ -0.96
HMGN1-201ENST00000288344 CYP4X1Q8N118 509 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 OR6C4Q8NGE1 309 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 STYXQ8WUJ0 223 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 SCG3Q8WXD2 468 aaKnown RBP9.03□□□□□ -0.96
HMGN1-201ENST00000288344 CPT1BQ92523 772 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 PEX13Q92968 403 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 DNAJC1Q96KC8 554 aaKnown RBP9.03□□□□□ -0.96
HMGN1-201ENST00000288344 TIMM29Q9BSF4 260 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 AP1M1Q9BXS5 423 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 GSDMCQ9BYG8 508 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 TWSG1Q9GZX9 223 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 SUDS3Q9H7L9 328 aaPredicted RBP9.03□□□□□ -0.96
HMGN1-201ENST00000288344 TREX1Q9NSU2 369 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 PIH1D1Q9NWS0 290 aaKnown RBP9.03□□□□□ -0.96
HMGN1-201ENST00000288344 SCHIP1Q9P0W5 487 aaPredicted RBP9.03□□□□□ -0.96
HMGN1-201ENST00000288344 ZNF624Q9P2J8 865 aaPredicted RBP9.03□□□□□ -0.96
HMGN1-201ENST00000288344 SLC2A6Q9UGQ3 507 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 PCYOX1Q9UHG3 505 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 ENTPD2Q9Y5L3 495 aa9.03□□□□□ -0.96
HMGN1-201ENST00000288344 AHCTF1Q8WYP5 2266 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 SMG1Q96Q15 3661 aaKnown RBP9.02□□□□□ -0.97
HMGN1-201ENST00000288344 ATMQ13315 3056 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 CPED1A4D0V7 1026 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 TMEM229AB2RXF0 380 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 CCL22O00626 93 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 KIF5CO60282 957 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 PRMT3O60678 531 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 KCNJ13O60928 360 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 LILRA1O75019 489 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 TCEA3O75764 348 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 CDK14O94921 469 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 CRTAMO95727 393 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 IFNB1P01574 187 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 ZNF7P17097 686 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-201ENST00000288344 XRCC1P18887 633 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-201ENST00000288344 TPSB2P20231 275 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 ADRA1DP25100 572 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 FOXN2P32314 431 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 GPR3P46089 330 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 MAZP56270 477 aaKnown RBP9.02□□□□□ -0.97
HMGN1-201ENST00000288344 CCL7P80098 99 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 CDK16Q00536 496 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 PDE1BQ01064 536 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 CCDC173Q0VFZ6 552 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 CDH17Q12864 832 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 ILF3Q12906 894 aaKnown RBP eCLIP9.02□□□□□ -0.97
HMGN1-201ENST00000288344 CLCA4Q14CN2 919 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 TCEA2Q15560 299 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 TPSAB1Q15661 275 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 ISXQ2M1V0 245 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 GPR33Q49SQ1 333 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 BCL7AQ4VC05 210 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 AGAP9Q5VTM2 703 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 ANKRD22Q5VYY1 191 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 METRNLQ641Q3 311 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 SLC30A9Q6PML9 568 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 IGF2-ASQ6U949 168 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 FAM83HQ6ZRV2 1179 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-201ENST00000288344 MARK2Q7KZI7 788 aaKnown RBP9.02□□□□□ -0.97
HMGN1-201ENST00000288344 CHST15Q7LFX5 561 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-201ENST00000288344 SNX20Q7Z614 316 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 SPRED1Q7Z699 444 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 GALNT13Q8IUC8 556 aa9.02□□□□□ -0.97
HMGN1-201ENST00000288344 NXPE1Q8N323 547 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms