RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 LBX1P52954 281 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 C16orf72Q14CZ0 275 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 ATXN7L2Q5T6C5 722 aaPredicted RBP18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 Q6ZNB5 142 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 ITIH5Q86UX2 942 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 PIM3Q86V86 326 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 LPCAT1Q8NF37 534 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 MDGA1Q8NFP4 955 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 OR6K2Q8NGY2 324 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 TCF25Q9BQ70 676 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 FEM1AQ9BSK4 669 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 CFAP97Q9P2B7 532 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 STOML2Q9UJZ1 356 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 FNDC3AQ9Y2H6 1198 aaKnown RBP18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 SH3GLB1Q9Y371 365 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 CROCCQ5TZA2 2017 aa18.14■□□□□ 0.49
PDLIM3-201ENST00000284767 DHRS12A0PJE2 317 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 EFCAB14O75071 495 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 PAPSS2O95340 614 aaPredicted RBP18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 CCR2P41597 374 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 BNIP2Q12982 314 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 ACAP2Q15057 778 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 SLC36A3Q495N2 470 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 PLPP4Q5VZY2 271 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 ELMSAN1Q6PJG2 1045 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 APCDD1Q8J025 514 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 OR9I1Q8NGQ6 314 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 SNRNP27Q8WVK2 155 aaKnown RBP18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 TSPAN17Q96FV3 270 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 DOK1Q99704 481 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 TDRD1Q9BXT4 1180 aaKnown RBP18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 CD320Q9NPF0 282 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 SLC7A4O43246 635 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 CBFA2T3O75081 653 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 BAIAP3O94812 1187 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 S1PR4O95977 384 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 GNAO1P09471 354 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 HSD17B1P14061 328 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 CDKN2DP55273 166 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 CDH18Q13634 790 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 LILRA6Q6PI73 481 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 EPHX4Q8IUS5 362 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 FUNDC1Q8IVP5 155 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 KREMEN2Q8NCW0 462 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 BRSK1Q8TDC3 778 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 ANKRD49Q8WVL7 239 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 SLC39A3Q9BRY0 314 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 NPLQ9BXD5 320 aaPredicted RBP18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 TM6SF2Q9BZW4 377 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 MFSD1Q9H3U5 465 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 GSTO2Q9H4Y5 243 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 VPS51Q9UID3 782 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 NDUFAF1Q9Y375 327 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 ANKRD36A6QL64 1941 aa18.13■□□□□ 0.49
PDLIM3-201ENST00000284767 DYTNA2CJ06 578 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 RFPL2O75678 378 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 FGBP02675 491 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 IMPDH1P20839 514 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 GPX3P22352 226 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 FASP25445 335 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 PSMA4P25789 261 aaKnown RBP18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 CLCN5P51795 746 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 CTBSQ01459 385 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 TRAF2Q12933 501 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 SLC14A2Q15849 920 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 LCN8Q6JVE9 175 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 GABPB2Q8TAK5 448 aaPredicted RBP18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 MRPS31Q92665 395 aaKnown RBP18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 VPS50Q96JG6 964 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 TBC1D23Q9NUY8 699 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 AURKCQ9UQB9 309 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 CCL26Q9Y258 94 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 RAI2Q9Y5P3 530 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 NME4O00746 187 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 EPOP01588 193 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 DCKP27707 260 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 TPP2P29144 1249 aaPredicted RBP18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 HTRA4P83105 476 aaPredicted RBP18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 ATP6AP1Q15904 470 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 SPATS1Q496A3 300 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 HECTD2Q5U5R9 776 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 TMEM207Q6UWW9 146 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 CYHR1Q6ZMK1 362 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 LYSMD3Q7Z3D4 306 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 MINDY1Q8N5J2 469 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 CALML6Q8TD86 181 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 CENPNQ96H22 339 aaPredicted RBP18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 CXorf21Q9HAI6 301 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 OR51B4Q9Y5P0 310 aa18.12■□□□□ 0.49
PDLIM3-201ENST00000284767 RPL10P27635 214 aaKnown RBP18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 CD97P48960 835 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 PITRM1Q5JRX3 1037 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 FAM219BQ5XKK7 198 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 RETREG3Q86VR2 466 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 EFHBQ8N7U6 833 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 OR4K2Q8NGD2 314 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 BORCS5Q969J3 196 aa18.11■□□□□ 0.49
PDLIM3-201ENST00000284767 L3HYPDHQ96EM0 354 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms