RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SLC4A1P02730 911 aa8.8□□□□□ -1
TPM3-201ENST00000271850 ZNF7P17097 686 aaPredicted RBP8.8□□□□□ -1
TPM3-201ENST00000271850 RPL10P27635 214 aaKnown RBP8.8□□□□□ -1
TPM3-201ENST00000271850 HNRNPH3P31942 346 aaKnown RBP8.8□□□□□ -1
TPM3-201ENST00000271850 CASP14P31944 242 aa8.8□□□□□ -1
TPM3-201ENST00000271850 CAPZBP47756 277 aa8.8□□□□□ -1
TPM3-201ENST00000271850 SEPHS1P49903 392 aa8.8□□□□□ -1
TPM3-201ENST00000271850 DRG2P55039 364 aaKnown RBP8.8□□□□□ -1
TPM3-201ENST00000271850 ADCY2Q08462 1091 aa8.8□□□□□ -1
TPM3-201ENST00000271850 MAP7Q14244 749 aa8.8□□□□□ -1
TPM3-201ENST00000271850 GPR18Q14330 331 aa8.8□□□□□ -1
TPM3-201ENST00000271850 HADHQ16836 314 aaKnown RBP8.8□□□□□ -1
TPM3-201ENST00000271850 CRTC2Q53ET0 693 aaPredicted RBP8.8□□□□□ -1
TPM3-201ENST00000271850 ZNF569Q5MCW4 686 aa8.8□□□□□ -1
TPM3-201ENST00000271850 ABRAXAS1Q6UWZ7 409 aa8.8□□□□□ -1
TPM3-201ENST00000271850 FAM83HQ6ZRV2 1179 aaPredicted RBP8.8□□□□□ -1
TPM3-201ENST00000271850 NDUFAF2Q8N183 169 aa8.8□□□□□ -1
TPM3-201ENST00000271850 TTC30BQ8N4P2 665 aa8.8□□□□□ -1
TPM3-201ENST00000271850 TRAM1L1Q8N609 369 aa8.8□□□□□ -1
TPM3-201ENST00000271850 GALNT6Q8NCL4 622 aa8.8□□□□□ -1
TPM3-201ENST00000271850 C9orf43Q8TAL5 461 aaPredicted RBP8.8□□□□□ -1
TPM3-201ENST00000271850 NAT14Q8WUY8 206 aa8.8□□□□□ -1
TPM3-201ENST00000271850 MIB2Q96AX9 1013 aa8.8□□□□□ -1
TPM3-201ENST00000271850 CATSPER2Q96P56 530 aa8.8□□□□□ -1
TPM3-201ENST00000271850 TGM7Q96PF1 710 aa8.8□□□□□ -1
TPM3-201ENST00000271850 ZPBPQ9BS86 351 aa8.8□□□□□ -1
TPM3-201ENST00000271850 SPATA16Q9BXB7 569 aa8.8□□□□□ -1
TPM3-201ENST00000271850 ZMYND15Q9H091 742 aa8.8□□□□□ -1
TPM3-201ENST00000271850 NAT10Q9H0A0 1025 aaKnown RBP8.8□□□□□ -1
TPM3-201ENST00000271850 OSGEPL1Q9H4B0 414 aa8.8□□□□□ -1
TPM3-201ENST00000271850 ZNF768Q9H5H4 540 aaKnown RBP8.8□□□□□ -1
TPM3-201ENST00000271850 ZFYVE1Q9HBF4 777 aa8.8□□□□□ -1
TPM3-201ENST00000271850 TRIM39Q9HCM9 518 aa8.8□□□□□ -1
TPM3-201ENST00000271850 SLC40A1Q9NP59 571 aa8.8□□□□□ -1
TPM3-201ENST00000271850 SEMA5BQ9P283 1151 aa8.8□□□□□ -1
TPM3-201ENST00000271850 CTTNBP2NLQ9P2B4 639 aa8.8□□□□□ -1
TPM3-201ENST00000271850 TP53TG5Q9Y2B4 290 aa8.8□□□□□ -1
TPM3-201ENST00000271850 DNAJC16Q9Y2G8 782 aa8.8□□□□□ -1
TPM3-201ENST00000271850 BZW2Q9Y6E2 419 aaKnown RBP8.8□□□□□ -1
TPM3-201ENST00000271850 CSMD1Q96PZ7 3565 aa8.79□□□□□ -1
TPM3-201ENST00000271850 DNAJB5O75953 348 aa8.79□□□□□ -1
TPM3-201ENST00000271850 KIAA0754O94854 1291 aa8.79□□□□□ -1
TPM3-201ENST00000271850 SLC25A14O95258 325 aaPredicted RBP8.79□□□□□ -1
TPM3-201ENST00000271850 MX2P20592 715 aa8.79□□□□□ -1
TPM3-201ENST00000271850 PTPN3P26045 913 aa8.79□□□□□ -1
TPM3-201ENST00000271850 MAN1A1P33908 653 aa8.79□□□□□ -1
TPM3-201ENST00000271850 CHRNA4P43681 627 aa8.79□□□□□ -1
TPM3-201ENST00000271850 CTSCP53634 463 aa8.79□□□□□ -1
TPM3-201ENST00000271850 UBASH3AP57075 661 aa8.79□□□□□ -1
TPM3-201ENST00000271850 WASHC5Q12768 1159 aa8.79□□□□□ -1
TPM3-201ENST00000271850 NFKBIBQ15653 356 aa8.79□□□□□ -1
TPM3-201ENST00000271850 PCSK7Q16549 785 aa8.79□□□□□ -1
TPM3-201ENST00000271850 ATP13A5Q4VNC0 1218 aa8.79□□□□□ -1
TPM3-201ENST00000271850 C16orf46Q6P387 395 aa8.79□□□□□ -1
TPM3-201ENST00000271850 KDELC1Q6UW63 502 aa8.79□□□□□ -1
TPM3-201ENST00000271850 PRSS42Q7Z5A4 293 aa8.79□□□□□ -1
TPM3-201ENST00000271850 PHYKPLQ8IUZ5 450 aa8.79□□□□□ -1
TPM3-201ENST00000271850 CCNYQ8ND76 341 aa8.79□□□□□ -1
TPM3-201ENST00000271850 KLHL6Q8WZ60 621 aa8.79□□□□□ -1
TPM3-201ENST00000271850 SH3KBP1Q96B97 665 aa8.79□□□□□ -1
TPM3-201ENST00000271850 ELMO2Q96JJ3 720 aa8.79□□□□□ -1
TPM3-201ENST00000271850 AGAP3Q96P47 875 aa8.79□□□□□ -1
TPM3-201ENST00000271850 OR6C1Q96RD1 312 aa8.79□□□□□ -1
TPM3-201ENST00000271850 GORASP1Q9BQQ3 440 aa8.79□□□□□ -1
TPM3-201ENST00000271850 TIMM29Q9BSF4 260 aa8.79□□□□□ -1
TPM3-201ENST00000271850 ZSCAN5AQ9BUG6 496 aa8.79□□□□□ -1
TPM3-201ENST00000271850 TRIM55Q9BYV6 548 aa8.79□□□□□ -1
TPM3-201ENST00000271850 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.79□□□□□ -1
TPM3-201ENST00000271850 ULBP3Q9BZM4 244 aa8.79□□□□□ -1
TPM3-201ENST00000271850 MAGEE1Q9HCI5 957 aa8.79□□□□□ -1
TPM3-201ENST00000271850 BPIFA1Q9NP55 256 aa8.79□□□□□ -1
TPM3-201ENST00000271850 UBP1Q9NZI7 540 aa8.79□□□□□ -1
TPM3-201ENST00000271850 UVRAGQ9P2Y5 699 aa8.79□□□□□ -1
TPM3-201ENST00000271850 SAE1Q9UBE0 346 aaPredicted RBP8.79□□□□□ -1
TPM3-201ENST00000271850 TRIM10Q9UDY6 481 aa8.79□□□□□ -1
TPM3-201ENST00000271850 HYOU1Q9Y4L1 999 aa8.79□□□□□ -1
TPM3-201ENST00000271850 HEY1Q9Y5J3 304 aa8.79□□□□□ -1
TPM3-201ENST00000271850 MED13Q9UHV7 2174 aa8.79□□□□□ -1
TPM3-201ENST00000271850 TNRC6AQ8NDV7 1962 aaKnown RBP8.79□□□□□ -1
TPM3-201ENST00000271850 UNC79Q9P2D8 2635 aa8.78□□□□□ -1
TPM3-201ENST00000271850 IGHV5-51A0A0C4DH38 117 aa8.78□□□□□ -1
TPM3-201ENST00000271850 LOC285095A0A1B0GVY8 99 aa8.78□□□□□ -1
TPM3-201ENST00000271850 SYCE3A1L190 88 aa8.78□□□□□ -1
TPM3-201ENST00000271850 LRRD1A4D1F6 860 aa8.78□□□□□ -1
TPM3-201ENST00000271850 OR5K4A6NMS3 321 aa8.78□□□□□ -1
TPM3-201ENST00000271850 ZNF487B1APH4 448 aa8.78□□□□□ -1
TPM3-201ENST00000271850 MTSS1O43312 755 aa8.78□□□□□ -1
TPM3-201ENST00000271850 SPAG6O75602 509 aa8.78□□□□□ -1
TPM3-201ENST00000271850 NDUFA10O95299 355 aa8.78□□□□□ -1
TPM3-201ENST00000271850 KRT7P08729 469 aa8.78□□□□□ -1
TPM3-201ENST00000271850 TMEM253P0C7T8 217 aa8.78□□□□□ -1
TPM3-201ENST00000271850 RNF224P0DH78 156 aa8.78□□□□□ -1
TPM3-201ENST00000271850 FGF5P12034 268 aa8.78□□□□□ -1
TPM3-201ENST00000271850 FOLR1P15328 257 aa8.78□□□□□ -1
TPM3-201ENST00000271850 PECAM1P16284 738 aaPredicted RBP8.78□□□□□ -1
TPM3-201ENST00000271850 TCN2P20062 427 aa8.78□□□□□ -1
TPM3-201ENST00000271850 CA4P22748 312 aa8.78□□□□□ -1
TPM3-201ENST00000271850 DLSTP36957 453 aa8.78□□□□□ -1
TPM3-201ENST00000271850 CD97P48960 835 aa8.78□□□□□ -1
TPM3-201ENST00000271850 PPM1FP49593 454 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 628.9 ms