RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 SERPINB5P36952 375 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 RGS4P49798 205 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 OVGP1Q12889 678 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 OR4D1Q15615 310 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 EOGTQ5NDL2 527 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 C6orf89Q6UWU4 347 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 PIWIL4Q7Z3Z4 852 aaKnown RBP13.92□□□□□ -0.18
SS18-201ENST00000269137 ZBTB2Q8N680 514 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 DEFB123Q8N688 67 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 SGF29Q96ES7 293 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 DRC3Q9H069 523 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 ZNF395Q9H8N7 513 aaPredicted RBP13.92□□□□□ -0.18
SS18-201ENST00000269137 CNOT6Q9ULM6 557 aaKnown RBP13.92□□□□□ -0.18
SS18-201ENST00000269137 A0A1W2PP55 124 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 EIF3FO00303 357 aaPredicted RBP13.92□□□□□ -0.18
SS18-201ENST00000269137 QSOX1O00391 747 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 SNUPNO95149 360 aaKnown RBP13.92□□□□□ -0.18
SS18-201ENST00000269137 CBSLP0DN79 551 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 MSH3P20585 1137 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 DGKAP23743 735 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 ARRB2P32121 409 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 CBSP35520 551 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 NAGLUP54802 743 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 AGERQ15109 404 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 TTLL9Q3SXZ7 439 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 PPP4R1Q8TF05 950 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 SORT1Q99523 831 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 NPHS2Q9NP85 383 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 FBXL12Q9NXK8 326 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 SERGEFQ9UGK8 458 aa13.92□□□□□ -0.18
SS18-201ENST00000269137 RRP15Q9Y3B9 282 aaKnown RBP13.92□□□□□ -0.18
SS18-201ENST00000269137 NEMP2A6NFY4 417 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 SYCE1LA8MT33 242 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 SGTAO43765 313 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 NPHS1O60500 1241 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 SMIM24O75264 130 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 RNASEH2AO75792 299 aaKnown RBP13.91□□□□□ -0.18
SS18-201ENST00000269137 TM7SF2O76062 418 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 DNTTP04053 509 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 MTHFD2P13995 350 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 ITGB6P18564 788 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 RCN2Q14257 317 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 TSNQ15631 228 aaKnown RBP13.91□□□□□ -0.18
SS18-201ENST00000269137 KHDC1Q4VXA5 237 aaKnown RBP13.91□□□□□ -0.18
SS18-201ENST00000269137 TRIM67Q6ZTA4 783 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 CACUL1Q86Y37 369 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 PHYKPLQ8IUZ5 450 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 NAT14Q8WUY8 206 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 C10orf82Q8WW14 230 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 FUBP1Q96AE4 644 aaKnown RBP13.91□□□□□ -0.18
SS18-201ENST00000269137 EPHX3Q9H6B9 360 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 NCKIPSDQ9NZQ3 722 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 MBD1Q9UIS9 605 aaPredicted RBP13.91□□□□□ -0.18
SS18-201ENST00000269137 IKZF3Q9UKT9 509 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 DUSP12Q9UNI6 340 aa13.91□□□□□ -0.18
SS18-201ENST00000269137 IGLON5A6NGN9 336 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 CDC7O00311 574 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 BTN3A1O00481 513 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 KPNA5O15131 536 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 MTX2O75431 263 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 LYPLA1O75608 230 aaPredicted RBP13.9□□□□□ -0.18
SS18-201ENST00000269137 PCDH8O95206 1070 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 ENO3P13929 434 aaPredicted RBP13.9□□□□□ -0.18
SS18-201ENST00000269137 IL9P15248 144 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 IMPDH1P20839 514 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 AOAHP28039 575 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 GPR1P46091 355 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 SF3A3Q12874 501 aaKnown RBP eCLIP13.9□□□□□ -0.184e-6■■■■□ 22.2
SS18-201ENST00000269137 GBX1Q14549 363 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 MLF2Q15773 248 aaPredicted RBP13.9□□□□□ -0.18
SS18-201ENST00000269137 ACSBG2Q5FVE4 666 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 RAET1GQ6H3X3 334 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 ATG14Q6ZNE5 492 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 USP30Q70CQ3 517 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 ADAMTSL2Q86TH1 951 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 PELI3Q8N2H9 469 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 RPLP0P6Q8NHW5 317 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 PIWIL2Q8TC59 973 aaKnown RBP13.9□□□□□ -0.18
SS18-201ENST00000269137 L3HYPDHQ96EM0 354 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 CNDP1Q96KN2 507 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 SIKE1Q9BRV8 207 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 HAO1Q9UJM8 370 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 RNF112Q9ULX5 631 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 MMP17Q9ULZ9 603 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 TMCO1Q9UM00 188 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 USH1CQ9Y6N9 552 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 NPEPPSL1A6NEC2 478 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 K7ESM1 405 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 PLRG1O43660 514 aaKnown RBP13.9□□□□□ -0.18
SS18-201ENST00000269137 KLK8O60259 260 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 FTH1P02794 183 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 CCR7P32248 378 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 SFSWAPQ12872 951 aaKnown RBP13.9□□□□□ -0.18
SS18-201ENST00000269137 TMEM115Q12893 351 aaPredicted RBP13.9□□□□□ -0.18
SS18-201ENST00000269137 TTC31Q49AM3 519 aaPredicted RBP13.9□□□□□ -0.18
SS18-201ENST00000269137 ADAMTSL4Q6UY14 1074 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 CYHR1Q6ZMK1 362 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 DET1Q7L5Y6 550 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 MYO1HQ8N1T3 1032 aa13.9□□□□□ -0.18
SS18-201ENST00000269137 RFWD2Q8NHY2 731 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms