RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 UGT1A6P19224 532 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 UGT1A1P22309 533 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 UGT1A4P22310 534 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 UGT1A3P35503 534 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 UGT1A5P35504 534 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 PLA2G5P39877 138 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 SOX9P48436 509 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 RPL14P50914 215 aaKnown RBP15.17■□□□□ 0.02
COPS3-201ENST00000268717 TBCCQ15814 346 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 ATP13A5Q4VNC0 1218 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 ARL13AQ5H913 290 aaPredicted RBP15.17■□□□□ 0.02
COPS3-201ENST00000268717 CFAP157Q5JU67 520 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 NAIF1Q69YI7 327 aaPredicted RBP15.17■□□□□ 0.02
COPS3-201ENST00000268717 SERPINA13PQ6UXR4 307 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 FRMD7Q6ZUT3 714 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 CYP2U1Q7Z449 544 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 MTDHQ86UE4 582 aaKnown RBP15.17■□□□□ 0.02
COPS3-201ENST00000268717 ZNF687Q8N1G0 1237 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 TRAM1L1Q8N609 369 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 ZNF781Q8N8C0 355 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 SIDT2Q8NBJ9 832 aaKnown RBP15.17■□□□□ 0.02
COPS3-201ENST00000268717 FAM3CQ92520 227 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 CHFRQ96EP1 664 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 TMEM237Q96Q45 408 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 PANX3Q96QZ0 392 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 ZSCAN5AQ9BUG6 496 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 UNKQ9C0B0 810 aaKnown RBP15.17■□□□□ 0.02
COPS3-201ENST00000268717 FAM83DQ9H4H8 585 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 A8MX80 341 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 MATN2O00339 956 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 KPNA3O00505 521 aaPredicted RBP15.17■□□□□ 0.02
COPS3-201ENST00000268717 KLK8O60259 260 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 DNAJC8O75937 253 aaPredicted RBP15.17■□□□□ 0.02
COPS3-201ENST00000268717 UNC5CO95185 931 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 KITP10721 976 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 SERPINB3P29508 390 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 RGS4P49798 205 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 HERVK_113P63132 956 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 SEMG2Q02383 582 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 NHLH1Q02575 133 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 ZBTB16Q05516 673 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 FZD5Q13467 585 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 KRT72Q14CN4 511 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 OR4D1Q15615 310 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 SPRED3Q2MJR0 410 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 HENMT1Q5T8I9 393 aaKnown RBP15.17■□□□□ 0.02
COPS3-201ENST00000268717 TECPR1Q7Z6L1 1165 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 RAB44Q7Z6P3 723 aaPredicted RBP15.17■□□□□ 0.02
COPS3-201ENST00000268717 RALGPS2Q86X27 583 aaPredicted RBP15.17■□□□□ 0.02
COPS3-201ENST00000268717 SFTPA1Q8IWL2 248 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 LSMEM2Q8N112 164 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 PIP4K2CQ8TBX8 421 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 CLDN23Q96B33 292 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 FAM122AQ96E09 287 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 SGF29Q96ES7 293 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 FAR2Q96K12 515 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 VPS35Q96QK1 796 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 FAM129BQ96TA1 746 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 SLC30A3Q99726 388 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 C1QTNF3Q9BXJ4 246 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 ERVK-6Q9BXR3 956 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 PNPOQ9NVS9 261 aa15.17■□□□□ 0.02
COPS3-201ENST00000268717 NDRG2Q9UN36 371 aaKnown RBP15.17■□□□□ 0.02
COPS3-201ENST00000268717 PIEZO1Q92508 2521 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 VPS13AQ96RL7 3174 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 NEMP2A6NFY4 417 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 C1QTNF3-AMACRE9PGA6 284 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 SPECC1L-ADORA2AF8WAN1 911 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 STX16-NPEPL1H3BU86 382 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 QSOX1O00391 747 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 STX16O14662 325 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 HDAC3O15379 428 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 MAGEC1O60732 1142 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 AP2A2O94973 939 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 CHRNGP07510 517 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 SERPINA6P08185 405 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 CBSLP0DN79 551 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 MTHFD2P13995 350 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 CTHP32929 405 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 CA5AP35218 305 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 CBSP35520 551 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 MAGEA9P43362 315 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 TNFRSF4P43489 277 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 KCNC1P48547 511 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 CREB5Q02930 508 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 TTLL9Q3SXZ7 439 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 ZNF678Q5SXM1 525 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 TXNDC11Q6PKC3 985 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 LIPIQ6XZB0 460 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 ZNF765Q7L2R6 523 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 HSD11B1LQ7Z5J1 315 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 ADAMTSL2Q86TH1 951 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 AFAP1L2Q8N4X5 818 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 CCNYL1Q8N7R7 359 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 ZNF366Q8N895 744 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 FUBP1Q96AE4 644 aaKnown RBP15.16■□□□□ 0.02
COPS3-201ENST00000268717 RAB7BQ96AH8 199 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 LINGO1Q96FE5 620 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 BOCQ9BWV1 1114 aa15.16■□□□□ 0.02
COPS3-201ENST00000268717 HDAC8Q9BY41 377 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms