RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 BTN2A3PQ96KV6 586 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 OLFM1Q99784 485 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 AKTIPQ9H8T0 292 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 C8orf4Q9NR00 106 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 SUCOQ9UBS9 1254 aaKnown RBP11.45□□□□□ -0.58
VPS33A-201ENST00000267199 SLC9A8Q9Y2E8 581 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 ASB3Q9Y575 518 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 TUBGCP6Q96RT7 1819 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 OR51F1A6NGY5 319 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 AQP12BA6NM10 295 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 ZNF99A8MXY4 864 aaPredicted RBP11.45□□□□□ -0.58
VPS33A-201ENST00000267199 RHOQP17081 205 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 TYMPP19971 482 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 CTSKP43235 329 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 SPIBQ01892 262 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 DAG1Q14118 895 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 ACAP2Q15057 778 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 MOGQ16653 247 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 PPP1R3AQ16821 1122 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 TIFABQ6ZNK6 161 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 ERMP1Q7Z2K6 904 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 ADAMTSL2Q86TH1 951 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 RAB43Q86YS6 212 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 AQP12AQ8IXF9 295 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 GPR156Q8NFN8 814 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 OR10Q1Q8NGQ4 319 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 PSMG2Q969U7 264 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 YME1L1Q96TA2 773 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 GPR21Q99679 349 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 ACBD6Q9BR61 282 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 CIPCQ9C0C6 399 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 KAT8Q9H7Z6 458 aaKnown RBP11.45□□□□□ -0.58
VPS33A-201ENST00000267199 GNPTGQ9UJJ9 305 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 ZNF222Q9UK12 451 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 PHF24Q9UPV7 400 aa11.45□□□□□ -0.58
VPS33A-201ENST00000267199 ARL5CA6NH57 179 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 BTN3A3O00478 584 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 PSIP1O75475 530 aaKnown RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 RPP40O75818 363 aaKnown RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 OTCP00480 354 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 AHSGP02765 367 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 IL6P05231 212 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 UGT2B4P06133 528 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 UMPSP11172 480 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 PKMP14618 531 aaKnown RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 DDX5P17844 614 aaKnown RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 LCP2Q13094 533 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 LAPTM5Q13571 262 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 HERC3Q15034 1050 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 TIGD5Q53EQ6 642 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 KIAA0930Q6ICG6 404 aaPredicted RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 EIF3MQ7L2H7 374 aaKnown RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 DET1Q7L5Y6 550 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 ZC3HC1Q86WB0 502 aaKnown RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 CIR1Q86X95 450 aaPredicted RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 ZNF614Q8N883 585 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 RTL3Q8N8U3 475 aaKnown RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 NLGN2Q8NFZ4 835 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 SUN5Q8TC36 379 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 PHF10Q8WUB8 498 aaKnown RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 NARS2Q96I59 477 aaKnown RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 EMILIN2Q9BXX0 1053 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 ADAM30Q9UKF2 790 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 A0A1B0GW55 424 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 SH3PXD2BA1X283 911 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 ANXA5P08758 320 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 DUX4L2P0CJ85 424 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 DUX4L3P0CJ86 424 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 DUX4L4P0CJ87 422 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 DUX4L5P0CJ88 424 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 DUX4L6P0CJ89 424 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 DUX4L7P0CJ90 424 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 EFNA1P20827 205 aaPredicted RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 GRK4P32298 578 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 GSK3BP49841 420 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 RPL26P61254 145 aaKnown RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 PIGFQ07326 219 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 SLC10A2Q12908 348 aaPredicted RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 TMEM53Q6P2H8 277 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 NEK10Q6ZWH5 1172 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 OSTM1Q86WC4 334 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 LRRC58Q96CX6 371 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 HMCESQ96FZ2 354 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 NPY6RQ99463 290 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 KCNS3Q9BQ31 491 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 COPS4Q9BT78 406 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 TLE6Q9H808 572 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 DUX4Q9UBX2 424 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 GMEB1Q9Y692 573 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 A8MT66 165 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 FZD9O00144 591 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 CLPXO76031 633 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 NDST3O95803 873 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 EIF2S1P05198 315 aaKnown RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 MAGEA10P43363 369 aaPredicted RBP11.44□□□□□ -0.58
VPS33A-201ENST00000267199 CSNK2BP67870 215 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 TUBA4AP68366 448 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 DUSP4Q13115 394 aa11.44□□□□□ -0.58
VPS33A-201ENST00000267199 MZT2BQ6NZ67 158 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms