RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 WFDC5Q8TCV5 224 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 HERVK_113Q902F9 699 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 VPS33AQ96AX1 596 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 PPWD1Q96BP3 646 aaKnown RBP12.76□□□□□ -0.37
CPSF6-201ENST00000266679 MYO19Q96H55 970 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 TEX37Q96LM6 180 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 CDK15Q96Q40 435 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 SLC22A12Q96S37 553 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 HOPXQ9BPY8 73 aaPredicted RBP12.76□□□□□ -0.37
CPSF6-201ENST00000266679 EFHD1Q9BUP0 239 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 TRIM4Q9C037 500 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 GID8Q9NWU2 228 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 HACD3Q9P035 362 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 ABCD2Q9UBJ2 740 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 VPS51Q9UID3 782 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 YBX2Q9Y2T7 364 aaKnown RBP12.76□□□□□ -0.37
CPSF6-201ENST00000266679 PKP3Q9Y446 797 aa12.76□□□□□ -0.37
CPSF6-201ENST00000266679 SCN8AQ9UQD0 1980 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 C7orf72A4D263 438 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 K7ERQ8 282 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 GIPC1O14908 333 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 BAIAP3O94812 1187 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 CYBBP04839 570 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 PRR35P0CG20 571 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 ETS2P15036 469 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 PTGER3P43115 390 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 KCNK10P57789 538 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 NFYCQ13952 458 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 XKR7Q5GH72 579 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 IYDQ6PHW0 289 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 BLOC1S3Q6QNY0 202 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 FAM151BQ6UXP7 276 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 SLC15A3Q8IY34 581 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 CDYL2Q8N8U2 506 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 ZNF461Q8TAF7 563 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 KCNJ9Q92806 393 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.75□□□□□ -0.371e-6■■■■■ 31.4
CPSF6-201ENST00000266679 LRRC58Q96CX6 371 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 DUS3LQ96G46 650 aaKnown RBP12.75□□□□□ -0.37
CPSF6-201ENST00000266679 ZFRQ96KR1 1074 aaKnown RBP12.75□□□□□ -0.37
CPSF6-201ENST00000266679 MYRFLQ96LU7 910 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 CIB1Q99828 191 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 C1QTNF3Q9BXJ4 246 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 NKX2-4Q9H2Z4 354 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 ZNF576Q9H609 170 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 NOL11Q9H8H0 719 aaKnown RBP12.75□□□□□ -0.37
CPSF6-201ENST00000266679 CNOT11Q9UKZ1 510 aaKnown RBP12.75□□□□□ -0.37
CPSF6-201ENST00000266679 LZTS1Q9Y250 596 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 COMMD10Q9Y6G5 202 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 SLC30A1Q9Y6M5 507 aa12.75□□□□□ -0.37
CPSF6-201ENST00000266679 ASPDHA6ND91 283 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 E2F3O00716 465 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 PRRG1O14668 218 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 AKAP10O43572 662 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 ABLIM3O94929 683 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 OR6B1O95007 311 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 ESR1P03372 595 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 FAM58BPP0C7Q3 252 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 FOSL2P15408 326 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 GSTT1P30711 240 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 CASP2P42575 452 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 CLCN4P51793 760 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 CLCN7P51798 805 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 UFM1P61960 85 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 CACNG1Q06432 222 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 IKBKEQ14164 716 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 PABPC1LQ4VXU2 614 aaKnown RBP12.74□□□□□ -0.37
CPSF6-201ENST00000266679 OGFOD2Q6N063 350 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 FRA10AC1Q70Z53 315 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 EFL1Q7Z2Z2 1120 aaKnown RBP12.74□□□□□ -0.37
CPSF6-201ENST00000266679 SPPL2CQ8IUH8 684 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 RNF168Q8IYW5 571 aaPredicted RBP12.74□□□□□ -0.37
CPSF6-201ENST00000266679 AHI1Q8N157 1196 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 MINDY1Q8N5J2 469 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 PAF1Q8N7H5 531 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 HJURPQ8NCD3 748 aaPredicted RBP12.74□□□□□ -0.37
CPSF6-201ENST00000266679 OR52B6Q8NGF0 335 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 CANT1Q8WVQ1 401 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 FEM1AQ9BSK4 669 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 SLC2A11Q9BYW1 496 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 TRIM15Q9C019 465 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 P2RY12Q9H244 342 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 NUDT4Q9NZJ9 180 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 IL17CQ9P0M4 197 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 AURKCQ9UQB9 309 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 SAC3D1A6NKF1 404 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 H7C0S8 307 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 TNFAIP8O95379 198 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 PABPC4LP0CB38 370 aaKnown RBP12.74□□□□□ -0.37
CPSF6-201ENST00000266679 ATP6V1B1P15313 513 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 PSMC3P17980 439 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 SLC6A2P23975 617 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 CA5AP35218 305 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 CDH18Q13634 790 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 ARMC12Q5T9G4 340 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 ZNF783Q6ZMS7 281 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 TMCO2Q7Z6W1 182 aaPredicted RBP12.74□□□□□ -0.37
CPSF6-201ENST00000266679 CAMK1DQ8IU85 385 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 GALNT15Q8N3T1 639 aa12.74□□□□□ -0.37
CPSF6-201ENST00000266679 MAFAQ8NHW3 353 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms