RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 ATAD1Q8NBU5 361 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 SPATA22Q8NHS9 363 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 TPD52L3Q96J77 140 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 BTN2A3PQ96KV6 586 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 OSBPL2Q9H1P3 480 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 DYRK4Q9NR20 520 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 DKK3Q9UBP4 350 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 ADGRE2Q9UHX3 823 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 RWDD3Q9Y3V2 267 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 MEIS3P2A8K0S8 358 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 NT5C1B-RDH14C9J2C7 533 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 RGS14O43566 566 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 RAMP2O60895 175 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 NDUFS2O75306 463 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 FGBP02675 491 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 OR4Q2P0C623 313 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 MTHFD1P11586 935 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 CCR10P46092 362 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 SLC11A1P49279 550 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 IL2P60568 153 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 NCBP2-AS2Q69YL0 99 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 DENND5AQ6IQ26 1287 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 GPRIN3Q6ZVF9 776 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF605Q86T29 641 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 BBS7Q8IWZ6 715 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 OR9I1Q8NGQ6 314 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 FBXL20Q96IG2 436 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 RBM4BQ9BQ04 359 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 RBM4Q9BWF3 364 aaKnown RBP11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 ZYG11BQ9C0D3 744 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 MOCS1Q9NZB8 636 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 FNIP2Q9P278 1114 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 CRLS1Q9UJA2 301 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 TIMM22Q9Y584 194 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 ARID2Q68CP9 1835 aa11.43□□□□□ -0.58
CLSTN3-201ENST00000266546 A0A1W2PQH9 124 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 CLPXO76031 633 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 FTH1P02794 183 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 CKMP06732 381 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 ADH1AP07327 375 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 POLR2JP52435 117 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 DUSP4Q13115 394 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 SIM2Q14190 667 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 ACAP2Q15057 778 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 C6orf183Q5T699 404 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 KIAA0408Q6ZU52 694 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 SPATA19Q7Z5L4 167 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 DDX53Q86TM3 631 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 C19orf18Q8NEA5 215 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 TRPV3Q8NET8 790 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 ENKURQ8TC29 256 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 MFSD1Q9H3U5 465 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 STMN3Q9NZ72 180 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 SCML2Q9UQR0 700 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 CNTRLQ7Z7A1 2325 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 FAM25AB3EWG3 89 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 FAM25CB3EWG5 89 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 FAM25GB3EWG6 89 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 FADS2O95864 444 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 OR1E1P30953 314 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 ST8SIA6P61647 398 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 ARHGEF7Q14155 803 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 CCSAPQ6IQ19 270 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 FAM171BQ6P995 826 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 ARMCX6Q7L4S7 300 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF598Q86UK7 904 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 TAC4Q86UU9 113 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 KRT73Q86Y46 540 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF280BQ86YH2 543 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 NKAPQ8N5F7 415 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 FBXO22Q8NEZ5 403 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 TMIGD2Q96BF3 282 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 SLC47A1Q96FL8 570 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 MPP6Q9NZW5 540 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 CDC14AQ9UNH5 594 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 TMED5Q9Y3A6 229 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 K7EPI3 171 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 IRAK2O43187 625 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 BMP10O95393 424 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 GALTP07902 379 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 TAF10Q12962 218 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 C1DQ13901 141 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 TBC1D25Q3MII6 688 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 TJAP1Q5JTD0 557 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 SYPL2Q5VXT5 272 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 ZNF549Q6P9A3 640 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 GAB3Q8WWW8 586 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 FCRL2Q96LA5 508 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 EBF1Q9UH73 591 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 RAPGEFL1Q9UHV5 662 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 OGDHLQ9ULD0 1010 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 SLC27A5Q9Y2P5 690 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 SAGE2PA6NJ88 616 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 BCKDKO14874 412 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 PIP5K1BO14986 540 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 MSI1O43347 362 aaKnown RBP11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 TLR5O60602 858 aa11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 MT-CYBP00156 380 aaPredicted RBP11.42□□□□□ -0.58
CLSTN3-201ENST00000266546 MAXP61244 160 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms