RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 WNT6Q9Y6F9 365 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 PKD1L3Q7Z443 1732 aa15.27■□□□□ 0.03
TIMP3-201ENST00000266085 LINC00854A0A1B0GVQ3 168 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 ASMTP46597 345 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 CCR3P51677 355 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 POLR2JP52435 117 aaKnown RBP15.26■□□□□ 0.03
TIMP3-201ENST00000266085 WNT7BP56706 349 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 GRASPQ7Z6J2 395 aaPredicted RBP15.26■□□□□ 0.03
TIMP3-201ENST00000266085 GALNT13Q8IUC8 556 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 PQLC1Q8N2U9 271 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 PQLC3Q8N755 202 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 WFIKKN2Q8TEU8 576 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 CDKN2AIPNLQ96HQ2 116 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 MFHAS1Q9Y4C4 1052 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 INPPL1O15357 1258 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 PDE9AO76083 593 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 BEST1O76090 585 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 PFKMP08237 780 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 IQCF3P0C7M6 154 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 TTKP33981 857 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 CHN2P52757 468 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 KRR1Q13601 381 aaKnown RBP15.26■□□□□ 0.03
TIMP3-201ENST00000266085 HPS6Q86YV9 775 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 SIDT2Q8NBJ9 832 aaKnown RBP15.26■□□□□ 0.03
TIMP3-201ENST00000266085 HAPLN2Q9GZV7 340 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 GULP1Q9UBP9 304 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 MRPS33Q9Y291 106 aaKnown RBP15.26■□□□□ 0.03
TIMP3-201ENST00000266085 CAB39Q9Y376 341 aaPredicted RBP15.26■□□□□ 0.03
TIMP3-201ENST00000266085 MYH6P13533 1939 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 DLGAP3O95886 979 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 WDR4P57081 412 aaKnown RBP15.26■□□□□ 0.03
TIMP3-201ENST00000266085 GALNT2Q10471 571 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 MORN1Q5T089 497 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 SULT1C3Q6IMI6 304 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 PROSER1Q86XN7 944 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 WDTC1Q8N5D0 677 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 PSMD13Q9UNM6 376 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 GMPPBQ9Y5P6 360 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 SUV39H1O43463 412 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 OR4F21O95013 312 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 VIPP01282 170 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 CAPN1P07384 714 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 ENO2P09104 434 aaPredicted RBP15.26■□□□□ 0.03
TIMP3-201ENST00000266085 FSHRP23945 695 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 VEGFBP49765 207 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 CHIT1Q13231 466 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 DGCR6Q14129 220 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 PDGFRLQ15198 375 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 CCDC103Q8IW40 242 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 OR2AP1Q8NGE2 309 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 KLK6Q92876 244 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 DGCR6LQ9BY27 220 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 ZNF358Q9NW07 568 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 ZNF780BQ9Y6R6 833 aa15.26■□□□□ 0.03
TIMP3-201ENST00000266085 ATXN2Q99700 1313 aaKnown RBP15.25■□□□□ 0.03
TIMP3-201ENST00000266085 SCAMP1O15126 338 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 NPHS1O60500 1241 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 ALPIP09923 528 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 KCNJ11Q14654 390 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 LACTB2Q53H82 288 aaPredicted RBP15.25■□□□□ 0.03
TIMP3-201ENST00000266085 TBC1D21Q8IYX1 336 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 VPS35Q96QK1 796 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 GRIP2Q9C0E4 1043 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 EIF2B4Q9UI10 523 aaKnown RBP15.25■□□□□ 0.03
TIMP3-201ENST00000266085 UBR2Q8IWV8 1755 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 LRRC72A6NJI9 287 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 GDI1P31150 447 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 ILF3Q12906 894 aaKnown RBP eCLIP15.25■□□□□ 0.03
TIMP3-201ENST00000266085 BIKQ13323 160 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 GTF2H2Q13888 395 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 PDK3Q15120 406 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 INAQ16352 499 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 GPR33Q49SQ1 333 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 VPS26BQ4G0F5 336 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 GTF2H2CQ6P1K8 395 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 Q6ZVU0 165 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 CHST15Q7LFX5 561 aaPredicted RBP15.25■□□□□ 0.03
TIMP3-201ENST00000266085 BPIFB6Q8NFQ5 453 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 OR10T2Q8NGX3 314 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 WDR36Q8NI36 951 aaKnown RBP15.25■□□□□ 0.03
TIMP3-201ENST00000266085 CENPIQ92674 756 aaPredicted RBP15.25■□□□□ 0.03
TIMP3-201ENST00000266085 ZNF607Q96SK3 696 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 PTPN18Q99952 460 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 STRA6Q9BX79 667 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 PTGESO14684 152 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 OR6A2O95222 327 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 USP46P62068 366 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 RFX4Q33E94 735 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 ARMCX4Q5H9R4 360 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 PGAM4Q8N0Y7 254 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 ZCCHC7Q8N3Z6 543 aaKnown RBP15.25■□□□□ 0.03
TIMP3-201ENST00000266085 SFRP1Q8N474 314 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 SRFBP1Q8NEF9 429 aaKnown RBP15.25■□□□□ 0.03
TIMP3-201ENST00000266085 SLC22A17Q8WUG5 538 aa15.25■□□□□ 0.03
TIMP3-201ENST00000266085 RASGRP1O95267 797 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 HOXB6P17509 224 aaKnown RBP15.24■□□□□ 0.03
TIMP3-201ENST00000266085 FEN1P39748 380 aaKnown RBP15.24■□□□□ 0.03
TIMP3-201ENST00000266085 OLIG2Q13516 323 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 ABRAXAS1Q6UWZ7 409 aa15.24■□□□□ 0.03
TIMP3-201ENST00000266085 FAM20CQ8IXL6 584 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms