RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 SPESP1Q6UW49 350 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 ZNF467Q7Z7K2 595 aaPredicted RBP16.62■□□□□ 0.25
SQLE-201ENST00000265896 GFM2Q969S9 779 aaKnown RBP16.62■□□□□ 0.25
SQLE-201ENST00000265896 LHPPQ9H008 270 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 ARNT2Q9HBZ2 717 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 TAS2R13Q9NYV9 303 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 LIMD1Q9UGP4 676 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 ST14Q9Y5Y6 855 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 H0Y858 1186 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 GNGT2O14610 69 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 WISP3O95389 354 aaPredicted RBP16.62■□□□□ 0.25
SQLE-201ENST00000265896 HOXC13P31276 330 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 POLD2P49005 469 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 AFMIDQ63HM1 303 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 SMYD5Q6GMV2 418 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 MBOAT1Q6ZNC8 495 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 Q6ZSR9 355 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 ZNF554Q86TJ5 538 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 SFRP1Q8N474 314 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 KRTCAP2Q8N6L1 136 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 SMYD1Q8NB12 490 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 FRS2Q8WU20 508 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 FEM1CQ96JP0 617 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 CSF3RQ99062 836 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 NTN4Q9HB63 628 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 TLR9Q9NR96 1032 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 PKD2L2Q9NZM6 624 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 SQORQ9Y6N5 450 aa16.62■□□□□ 0.25
SQLE-201ENST00000265896 FAM155AB1AL88 458 aaPredicted RBP16.61■□□□□ 0.25
SQLE-201ENST00000265896 E5RI56 91 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 XPNPEP2O43895 674 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 DIRAS1O95057 198 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 HSD17B1P14061 328 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 TUBA4AP68366 448 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 RAD51Q06609 339 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 MAP2K5Q13163 448 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 INTS11Q5TA45 600 aaKnown RBP16.61■□□□□ 0.25
SQLE-201ENST00000265896 UMODL1-AS1Q8N2C9 162 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 BBS5Q8N3I7 341 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 ITFG1Q8TB96 612 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 NCLNQ969V3 563 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 ZUFSPQ96AP4 578 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 RHNO1Q9BSD3 238 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 TOR3AQ9H497 397 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 VAPAQ9P0L0 249 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 AGRPO00253 132 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 RHOQP17081 205 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 EFNA1P20827 205 aaPredicted RBP16.61■□□□□ 0.25
SQLE-201ENST00000265896 RXRGP48443 463 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 CARTPTQ16568 116 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 NADSYN1Q6IA69 706 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 KLHDC8BQ8IXV7 354 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 MFSD2AQ8NA29 543 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 SNX19Q92543 992 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 PLEKHA8Q96JA3 519 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 GLT1D1Q96MS3 346 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 NACA2Q9H009 215 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 PFDN4Q9NQP4 134 aa16.61■□□□□ 0.25
SQLE-201ENST00000265896 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.61■□□□□ 0.25
SQLE-201ENST00000265896 SH3PXD2BA1X283 911 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 ZSCAN9O15535 394 aaPredicted RBP16.6■□□□□ 0.25
SQLE-201ENST00000265896 FUCA1P04066 466 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 SERPINF2P08697 491 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 SLC2A4P14672 509 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 MC4RP32245 332 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 CYP2C18P33260 490 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 GATMP50440 423 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 SGSHP51688 502 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 RPL38P63173 70 aaKnown RBP16.6■□□□□ 0.25
SQLE-201ENST00000265896 TWF1Q12792 350 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 DGCR6Q14129 220 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 RCAN2Q14206 197 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 SLC14A2Q15849 920 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 CYP2A13Q16696 494 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 ANKRD26P1Q6NSI1 321 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 PRDM5Q9NQX1 630 aaPredicted RBP16.6■□□□□ 0.25
SQLE-201ENST00000265896 GKN1Q9NS71 199 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 AIG1Q9NVV5 245 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 TRNAU1APQ9NX07 287 aaKnown RBP16.6■□□□□ 0.25
SQLE-201ENST00000265896 PCTPQ9UKL6 214 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 ZNF510Q9Y2H8 683 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 LOC285095A0A1B0GVY8 99 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 SH3BGRLO75368 114 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 CA5AP35218 305 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 HSPA7P48741 367 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 NR1D2Q14995 579 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 ABRAXAS2Q15018 415 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 FAM110CQ1W6H9 321 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 GPSM1Q86YR5 675 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 C10orf111Q8N326 155 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 TMEM199Q8N511 208 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 TNIP2Q8NFZ5 429 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 ACDQ96AP0 544 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 NSUN3Q9H649 340 aaKnown RBP16.6■□□□□ 0.25
SQLE-201ENST00000265896 FAM8A1Q9UBU6 413 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 TLR6Q9Y2C9 796 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 GIT1Q9Y2X7 761 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 PCDHGA8Q9Y5G5 932 aa16.6■□□□□ 0.25
SQLE-201ENST00000265896 GOLGA4Q13439 2230 aaKnown RBP16.6■□□□□ 0.25
SQLE-201ENST00000265896 BBIP1A8MTZ0 92 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms