RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 FRMD6Q96NE9 622 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 COQ10BQ9H8M1 238 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 EXD2Q9NVH0 621 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 XPR1Q9UBH6 696 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 ENTPD4Q9Y227 616 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 SLC9A8Q9Y2E8 581 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 DCCP43146 1447 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 GSAPA4D1B5 854 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 ZNF99A8MXY4 864 aaPredicted RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 EFCAB9A8MZ26 197 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 AZIN1O14977 448 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 OIP5O43482 229 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 CETPP11597 493 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 TCF4P15884 667 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 OGNP20774 298 aaKnown RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 IDH2P48735 452 aaKnown RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 ZNF773Q6PK81 442 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 FANK1Q8TC84 345 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 RAET1EQ8TD07 263 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 SLC2A14Q8TDB8 520 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 CTRCQ99895 268 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 NBASA2RRP1 2371 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 VTNP04004 478 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 THPOP40225 353 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 DBPQ10586 325 aaPredicted RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 ESCO2Q56NI9 601 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 FNBP1LQ5T0N5 605 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 OVOS1Q6IE37 1185 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 TRIM40Q6P9F5 258 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 DNAAF5Q86Y56 855 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 WDSUB1Q8N9V3 476 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 CYP2W1Q8TAV3 490 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 ELMO1Q92556 727 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 MARK4Q96L34 752 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 GLT1D1Q96MS3 346 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 UCK2Q9BZX2 261 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 POLE4Q9NR33 117 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 CMTM6Q9NX76 183 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 EBF1Q9UH73 591 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 ZNFX1Q9P2E3 1918 aaKnown RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 SPATA31A1Q5TZJ5 1347 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 G3V2T6 193 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 PVALBP20472 110 aaPredicted RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 MYL9P24844 172 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 NUDT1P36639 197 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 FGD3Q5JSP0 725 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 C10orf107Q8IVU9 208 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 PARP8Q8N3A8 854 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 BCL7CQ8WUZ0 217 aaPredicted RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 HEXDCQ8WVB3 486 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 RCN3Q96D15 328 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 NUSAP1Q9BXS6 441 aaKnown RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 KCNMB3Q9NPA1 279 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 ARL15Q9NXU5 204 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 RPH3AQ9Y2J0 694 aaPredicted RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 CRYL1Q9Y2S2 319 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 SAMHD1Q9Y3Z3 626 aaKnown RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 CD2P06729 351 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 TPRG1LQ5T0D9 272 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 FKBP1CQ5VVH2 108 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 METTL2BQ6P1Q9 378 aaKnown RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 ARHGAP36Q6ZRI8 547 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 TMEM17Q86X19 198 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 CCDC71Q8IV32 467 aaPredicted RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 PCDH20Q8N6Y1 951 aaKnown RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 TMEM159Q96B96 161 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 REXO5Q96IC2 774 aaKnown RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.66□□□□□ -1.5
VCAN-201ENST00000265077 IL20Q9NYY1 176 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 H3BRB1 525 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 BCKDKO14874 412 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 POLR1CO15160 346 aaPredicted RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 RGS10O43665 173 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 NFICP08651 508 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 RAB2AP61019 212 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 GALNT1Q10472 559 aaPredicted RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 SCUBE3Q8IX30 993 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 TBC1D15Q8TC07 691 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 TCTEX1D2Q8WW35 142 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 ZFPM2Q8WW38 1151 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 TUT1Q9H6E5 874 aaKnown RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 IRAK3Q9Y616 596 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 TSTD3H0UI37 97 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 SLC28A1O00337 649 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 PRMT5O14744 637 aaPredicted RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 OR3A3P47888 321 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 RAB39AQ14964 217 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 PTGR2Q8N8N7 351 aaPredicted RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 TMEM161BQ8NDZ6 487 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 GATAD2BQ8WXI9 593 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 ZBTB14O43829 449 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 IRF1P10914 325 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 PTSQ03393 145 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 ELOAQ14241 798 aaKnown RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 INTS5Q6P9B9 1019 aaKnown RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 SLC41A1Q8IVJ1 513 aa5.66□□□□□ -1.5
VCAN-201ENST00000265077 ZNF557Q8N988 423 aaPredicted RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 SMG7Q92540 1137 aaKnown RBP5.66□□□□□ -1.5
VCAN-201ENST00000265077 SNAPC3Q92966 411 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms