RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 FBXO36Q8NEA4 188 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 NETO1Q8TDF5 533 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 ULK4Q96C45 1275 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 SCARF2Q96GP6 870 aaPredicted RBP18.1■□□□□ 0.49
SDF4-201ENST00000263741 TTC25Q96NG3 672 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 COPS8Q99627 209 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 SLC17A6Q9P2U8 582 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 ZC3H7BQ9UGR2 993 aaKnown RBP18.1■□□□□ 0.49
SDF4-201ENST00000263741 KCNK6Q9Y257 313 aa18.1■□□□□ 0.49
SDF4-201ENST00000263741 E7ESA3 106 aa18.09■□□□□ 0.49
SDF4-201ENST00000263741 CD3EAPO15446 510 aaKnown RBP18.09■□□□□ 0.49
SDF4-201ENST00000263741 ZNF883P0CG24 379 aa18.09■□□□□ 0.49
SDF4-201ENST00000263741 MYF5P13349 255 aa18.09■□□□□ 0.49
SDF4-201ENST00000263741 CTBSQ01459 385 aa18.09■□□□□ 0.49
SDF4-201ENST00000263741 GTF2H3Q13889 308 aa18.09■□□□□ 0.49
SDF4-201ENST00000263741 HLTFQ14527 1009 aaKnown RBP eCLIP18.09■□□□□ 0.49
SDF4-201ENST00000263741 RSPO4Q2I0M5 234 aaPredicted RBP18.09■□□□□ 0.49
SDF4-201ENST00000263741 GLE1Q53GS7 698 aaKnown RBP18.09■□□□□ 0.49
SDF4-201ENST00000263741 UNC5AQ6ZN44 842 aa18.09■□□□□ 0.49
SDF4-201ENST00000263741 NAXDQ8IW45 347 aa18.09■□□□□ 0.49
SDF4-201ENST00000263741 ZDHHC3Q9NYG2 299 aa18.09■□□□□ 0.49
SDF4-201ENST00000263741 SLC23A2Q9UGH3 650 aa18.09■□□□□ 0.49
SDF4-201ENST00000263741 CDV3Q9UKY7 258 aaKnown RBP18.09■□□□□ 0.49
SDF4-201ENST00000263741 PRSS21Q9Y6M0 314 aa18.09■□□□□ 0.49
SDF4-201ENST00000263741 ASXL3Q9C0F0 2248 aa18.08■□□□□ 0.49
SDF4-201ENST00000263741 TRIM38O00635 465 aa18.08■□□□□ 0.49
SDF4-201ENST00000263741 NDC80O14777 642 aa18.08■□□□□ 0.49
SDF4-201ENST00000263741 YKT6O15498 198 aa18.08■□□□□ 0.49
SDF4-201ENST00000263741 VEGFDO43915 354 aa18.08■□□□□ 0.49
SDF4-201ENST00000263741 POLBP06746 335 aa18.08■□□□□ 0.49
SDF4-201ENST00000263741 CARSP49589 748 aaKnown RBP18.08■□□□□ 0.49
SDF4-201ENST00000263741 LIMK1P53667 647 aa18.08■□□□□ 0.49
SDF4-201ENST00000263741 DRG2P55039 364 aaKnown RBP18.08■□□□□ 0.49
SDF4-201ENST00000263741 CCNI2Q6ZMN8 369 aaPredicted RBP18.08■□□□□ 0.49
SDF4-201ENST00000263741 CENPUQ71F23 418 aa18.08■□□□□ 0.49
SDF4-201ENST00000263741 NRROSQ86YC3 692 aa18.08■□□□□ 0.49
SDF4-201ENST00000263741 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.08■□□□□ 0.495e-7■■■■□ 26.7
SDF4-201ENST00000263741 C20orf96Q9NUD7 363 aaPredicted RBP18.08■□□□□ 0.49
SDF4-201ENST00000263741 DNAJC16Q9Y2G8 782 aa18.08■□□□□ 0.49
SDF4-201ENST00000263741 RP1P56715 2156 aa18.08■□□□□ 0.48
SDF4-201ENST00000263741 MAGEB16A2A368 324 aa18.08■□□□□ 0.48
SDF4-201ENST00000263741 CHUKO15111 745 aa18.08■□□□□ 0.48
SDF4-201ENST00000263741 SGTAO43765 313 aa18.08■□□□□ 0.48
SDF4-201ENST00000263741 PAMP19021 973 aa18.08■□□□□ 0.48
SDF4-201ENST00000263741 ECHS1P30084 290 aa18.08■□□□□ 0.48
SDF4-201ENST00000263741 TRMT10BQ6PF06 316 aaKnown RBP18.08■□□□□ 0.48
SDF4-201ENST00000263741 TMEM220Q6QAJ8 160 aa18.08■□□□□ 0.48
SDF4-201ENST00000263741 TAF8Q7Z7C8 310 aa18.08■□□□□ 0.48
SDF4-201ENST00000263741 DCUN1D1Q96GG9 259 aa18.08■□□□□ 0.48
SDF4-201ENST00000263741 ZCCHC2Q9C0B9 1178 aaKnown RBP18.08■□□□□ 0.48
SDF4-201ENST00000263741 FAM114A2Q9NRY5 505 aa18.08■□□□□ 0.48
SDF4-201ENST00000263741 SIRPGQ9P1W8 387 aa18.08■□□□□ 0.48
SDF4-201ENST00000263741 COL5A1P20908 1838 aaPredicted RBP18.08■□□□□ 0.48
SDF4-201ENST00000263741 SPTBN2O15020 2390 aa18.08■□□□□ 0.48
SDF4-201ENST00000263741 IGLV3-16A0A075B6K0 115 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 YY2O15391 372 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 ERVK-10P10266 1014 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 ELOCQ15369 112 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 INSCQ1MX18 579 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 ZNF470Q6ECI4 717 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 LRRTM4Q86VH4 590 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 DENND6AQ8IWF6 608 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 GSPT2Q8IYD1 628 aaKnown RBP18.07■□□□□ 0.48
SDF4-201ENST00000263741 DEFB124Q8NES8 71 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.07■□□□□ 0.486e-6■■□□□ 12.4
SDF4-201ENST00000263741 C9orf72Q96LT7 481 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 DOLKQ9UPQ8 538 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 FLRT2O43155 660 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 ACTR1BP42025 376 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 ACTR1AP61163 376 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 ARHGAP8P85298 464 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 CAV1Q03135 178 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 ILF3Q12906 894 aaKnown RBP eCLIP18.07■□□□□ 0.48
SDF4-201ENST00000263741 LONRF1Q17RB8 773 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 HSP90AA5PQ58FG0 334 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 C11orf96Q7Z7L8 435 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 RHBDD1Q8TEB9 315 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 OSGEPL1Q9H4B0 414 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 RMI1Q9H9A7 625 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 TRNAU1APQ9NX07 287 aaKnown RBP18.07■□□□□ 0.48
SDF4-201ENST00000263741 PCDHGB2Q9Y5G2 931 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 FAM169AQ9Y6X4 670 aa18.07■□□□□ 0.48
SDF4-201ENST00000263741 B4DGG1 531 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 LMO7DNF2Z398 122 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 SIGLEC6O43699 453 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 PIAS1O75925 651 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 EML2O95834 649 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 ANXA6P08133 673 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 HOXD11P31277 338 aaPredicted RBP18.06■□□□□ 0.48
SDF4-201ENST00000263741 GRK6P43250 576 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 SLC14A1Q13336 389 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 CTBP1Q13363 440 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 ZNF789Q5FWF6 425 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 SPANXN3Q5MJ09 141 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 UBAP2Q5T6F2 1119 aaKnown RBP18.06■□□□□ 0.48
SDF4-201ENST00000263741 NEPROQ6NW34 567 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 KCNMB4Q86W47 210 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 FSTL5Q8N475 847 aaPredicted RBP18.06■□□□□ 0.48
SDF4-201ENST00000263741 GPBAR1Q8TDU6 330 aa18.06■□□□□ 0.48
SDF4-201ENST00000263741 PATE1Q8WXA2 126 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms