RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 PAQR3Q6TCH7 311 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 CDHR3Q6ZTQ4 885 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 PHYKPLQ8IUZ5 450 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 C1orf210Q8IVY1 113 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 TMEFF1Q8IYR6 380 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 BANPQ8N9N5 519 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 DTWD2Q8NBA8 298 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 GIMAP7Q8NHV1 300 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 MDM1Q8TC05 714 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 FAM45AQ8TCE6 357 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 KCTD4Q8WVF5 259 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 ANKRD49Q8WVL7 239 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 COX14Q96I36 57 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 SMC6Q96SB8 1091 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 SELENOSQ9BQE4 189 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 ORAI3Q9BRQ5 295 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 APOOQ9BUR5 198 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 TEX101Q9BY14 249 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 MLXIPLQ9NP71 852 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 VPS9D1Q9Y2B5 631 aa9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.61□□□□□ -0.87
SNRNP40-201ENST00000263694 TMEM202A6NGA9 273 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 METTL12A8MUP2 240 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 E5RI56 91 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 POLR3GO15318 223 aaPredicted RBP9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 ESR1P03372 595 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 HNRNPA2B1P22626 353 aaKnown RBP9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 RPS3P23396 243 aaKnown RBP eCLIP9.6□□□□□ -0.874e-9■■■□□ 16.7
SNRNP40-201ENST00000263694 PBLDP30039 288 aaPredicted RBP9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 ATP5DP30049 168 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 RPA3P35244 121 aaPredicted RBP9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 CCNFP41002 786 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 ATP1A2P50993 1020 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 CLCN7P51798 805 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 ADARP55265 1226 aaKnown RBP9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 ZKSCAN8Q15776 578 aaPredicted RBP9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 PLA2G4EQ3MJ16 856 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 CRTC3Q6UUV7 619 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 MACC1Q6ZN28 852 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 GCNT7Q6ZNI0 430 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 ARMCX6Q7L4S7 300 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 LILRA3Q8N6C8 439 aaPredicted RBP9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 ANKRD42Q8N9B4 389 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 MGARPQ8TDB4 240 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 SCG3Q8WXD2 468 aaKnown RBP9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 ASB12Q8WXK4 309 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 FOXJ1Q92949 421 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 ISL2Q96A47 359 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 NXNL1Q96CM4 212 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 IER2Q9BTL4 223 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 C1QTNF7Q9BXJ2 289 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 STMN4Q9H169 189 aaPredicted RBP9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 WDR26Q9H7D7 661 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 GPAMQ9HCL2 828 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 TRIM39Q9HCM9 518 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 MRPL40Q9NQ50 206 aaKnown RBP9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 PRMT8Q9NR22 394 aaPredicted RBP9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 TM7SF3Q9NS93 570 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 KCTD5Q9NXV2 234 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 SLC17A7Q9P2U7 560 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 EIF2B4Q9UI10 523 aaKnown RBP9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 GNPTGQ9UJJ9 305 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 PCDHB1Q9Y5F3 818 aa9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 TDRD6O60522 2096 aaKnown RBP9.6□□□□□ -0.87
SNRNP40-201ENST00000263694 TMEM120BA0PK00 339 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 CFAP99D6REC4 459 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 COPEO14579 308 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 FPGTO14772 594 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 TYROBPO43914 113 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 VPS26AO75436 327 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 WISP3O95389 354 aaPredicted RBP9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 MPOP05164 745 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 OR56A5P0C7T3 313 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 CCDC166P0CW27 439 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 RALBP11234 206 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 AKT2P31751 481 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 CCR7P32248 378 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 GLRBP48167 497 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 IRX4P78413 519 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 DNAJC3Q13217 504 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 CSHL1Q14406 222 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 TCEA2Q15560 299 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 LAYNQ6UX15 382 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 ZNF547Q8IVP9 402 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 CENPLQ8N0S6 344 aaPredicted RBP9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 FBXL6Q8N531 539 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 OR13H1Q8NG92 308 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 CD200R1Q8TD46 325 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 EEF1AKMT1Q8WVE0 214 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 HSPA12BQ96MM6 686 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 SLC6A18Q96N87 628 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 C1QTNF1Q9BXJ1 281 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 PHPT1Q9NRX4 125 aaPredicted RBP9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 IGSF5Q9NSI5 407 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 TAS2R13Q9NYV9 303 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 TMEM216Q9P0N5 145 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 MOSPD1Q9UJG1 213 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 TLK1Q9UKI8 766 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 IKZF3Q9UKT9 509 aa9.59□□□□□ -0.87
SNRNP40-201ENST00000263694 PNMA8BQ9ULN7 279 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms