RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ALG11Q2TAA5 492 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.15□□□□□ -1.1
PTPN3-201ENST00000262539 C7orf57Q8NEG2 295 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 KCTD4Q8WVF5 259 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 ECSITQ9BQ95 431 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 CERS4Q9HA82 394 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 TMEM216Q9P0N5 145 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 ZNHIT2Q9UHR6 403 aa8.15□□□□□ -1.1
PTPN3-201ENST00000262539 LIN7AO14910 233 aaPredicted RBP8.15□□□□□ -1.11
PTPN3-201ENST00000262539 PHGDHO43175 533 aaKnown RBP8.15□□□□□ -1.11
PTPN3-201ENST00000262539 HMGA1P17096 107 aaKnown RBP8.15□□□□□ -1.11
PTPN3-201ENST00000262539 DGKGP49619 791 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 PLPP4Q5VZY2 271 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 LAYNQ6UX15 382 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 DPP10Q8N608 796 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 SCRN2Q96FV2 425 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 KCNS3Q9BQ31 491 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 EFCAB11Q9BUY7 163 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 CEP41Q9BYV8 373 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 SFXN1Q9H9B4 322 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 DDX28Q9NUL7 540 aaKnown RBP8.15□□□□□ -1.11
PTPN3-201ENST00000262539 ADGRE2Q9UHX3 823 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 NUDT5Q9UKK9 219 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 TRAF6Q9Y4K3 522 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 ZNF37AP17032 561 aaPredicted RBP8.15□□□□□ -1.11
PTPN3-201ENST00000262539 SERPINB10P48595 397 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 HNMTP50135 292 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 RPS24P62847 133 aaKnown RBP8.15□□□□□ -1.11
PTPN3-201ENST00000262539 CSNK2BP67870 215 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 KLF10Q13118 480 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 ATAD3BQ5T9A4 648 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 MSANTD1Q6ZTZ1 278 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 GPRIN3Q6ZVF9 776 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 CUZD1Q86UP6 607 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 FAM217AQ8IXS0 508 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 PGAM4Q8N0Y7 254 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 S100A13Q99584 98 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 SLC28A3Q9HAS3 691 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 CROTQ9UKG9 612 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 KCNE2Q9Y6J6 123 aa8.15□□□□□ -1.11
PTPN3-201ENST00000262539 C1orf232A0A0U1RR37 186 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 HCRTO43612 131 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 STK16O75716 305 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 MC4RP32245 332 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 S100A5P33763 92 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 CD68P34810 354 aaPredicted RBP8.14□□□□□ -1.11
PTPN3-201ENST00000262539 KCNQ1P51787 676 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 CYTH1Q15438 398 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 RNF44Q7L0R7 432 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 LRRC70Q7Z2Q7 622 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 LONP2Q86WA8 852 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 SH3RF2Q8TEC5 729 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 IRF7Q92985 503 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 GLMNQ92990 594 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 CXorf40BQ96DE9 158 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 BBS4Q96RK4 519 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 THUMPD3Q9BV44 507 aaKnown RBP8.14□□□□□ -1.11
PTPN3-201ENST00000262539 TBC1D10AQ9BXI6 508 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 PCBD2Q9H0N5 130 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 ENOPH1Q9UHY7 261 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 TMCC3Q9ULS5 477 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 NT5C1B-RDH14C9J2C7 533 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 HMGB3O15347 200 aaKnown RBP8.14□□□□□ -1.11
PTPN3-201ENST00000262539 GUCY1B2O75343 617 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 AHSGP02765 367 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 HERVK_113P63132 956 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 HTRA4P83105 476 aaPredicted RBP8.14□□□□□ -1.11
PTPN3-201ENST00000262539 BOP1Q14137 746 aaKnown RBP8.14□□□□□ -1.11
PTPN3-201ENST00000262539 PLEKHS1Q5SXH7 462 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 NXPE1Q8N323 547 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 ARL14EPQ8N8R7 260 aaPredicted RBP8.14□□□□□ -1.11
PTPN3-201ENST00000262539 FLCNQ8NFG4 579 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 SPATA22Q8NHS9 363 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 GRIN3AQ8TCU5 1115 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 KCNV2Q8TDN2 545 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 FEM1AQ9BSK4 669 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 ERVK-6Q9BXR3 956 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 ELOVL6Q9H5J4 265 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 CNTN5O94779 1100 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 MT-CYBP00156 380 aaPredicted RBP8.14□□□□□ -1.11
PTPN3-201ENST00000262539 ELF3P78545 371 aaPredicted RBP8.14□□□□□ -1.11
PTPN3-201ENST00000262539 KDSRQ06136 332 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 RUNX1T1Q06455 604 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 SLC34A1Q06495 639 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 CMC1Q7Z7K0 106 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 KBTBD6Q86V97 674 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 BPIFB1Q8TDL5 484 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 SGF29Q96ES7 293 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 GULP1Q9UBP9 304 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 KLHL20Q9Y2M5 609 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 A0A0J9YYE9 177 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 PGLSO95336 258 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 IFNA14P01570 189 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 TRBC1P01850 177 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 NMBRP28336 390 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 SRSF11Q05519 484 aaKnown RBP8.14□□□□□ -1.11
PTPN3-201ENST00000262539 CMPK2Q5EBM0 449 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 SDHAF4Q5VUM1 108 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 NCEH1Q6PIU2 408 aa8.14□□□□□ -1.11
PTPN3-201ENST00000262539 METTL6Q8TCB7 284 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms