RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 BMFQ96LC9 184 aa27.16■■□□□ 1.94
SMARCD3-201ENST00000262188 CAAP1Q9H8G2 361 aa27.16■■□□□ 1.94
SMARCD3-201ENST00000262188 NSMCE4AQ9NXX6 385 aa27.16■■□□□ 1.94
SMARCD3-201ENST00000262188 EIF2B4Q9UI10 523 aaKnown RBP27.16■■□□□ 1.94
SMARCD3-201ENST00000262188 DMDP11532 3685 aa27.16■■□□□ 1.94
SMARCD3-201ENST00000262188 PLXND1Q9Y4D7 1925 aa27.16■■□□□ 1.94
SMARCD3-201ENST00000262188 TRIM49D1C9J1S8 452 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 CDH16O75309 829 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 ITGB6P18564 788 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 CSE1LP55060 971 aaKnown RBP27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 ZNF460Q14592 562 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 TPRG1LQ5T0D9 272 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 LAYNQ6UX15 382 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 CERS6Q6ZMG9 384 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 GCNT7Q6ZNI0 430 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 TDRPQ86YL5 185 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 DDHD1Q8NEL9 900 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 DTX3LQ8TDB6 740 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 SGF29Q96ES7 293 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 SERAC1Q96JX3 654 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 C1QTNF7Q9BXJ2 289 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 INTS10Q9NVR2 710 aaKnown RBP27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 PCYT1BQ9Y5K3 369 aaPredicted RBP27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 A0A1W2PPM1 405 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 METTL12A8MUP2 240 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 PTGER3P43115 390 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 ADAMTSL4Q6UY14 1074 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 CMC1Q7Z7K0 106 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 NLRP8Q86W28 1048 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 LONP2Q86WA8 852 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 PHYKPLQ8IUZ5 450 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 GABPB2Q8TAK5 448 aaPredicted RBP27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 HIC2Q96JB3 615 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 ELMO2Q96JJ3 720 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 TCF12Q99081 682 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 OR2AG1Q9H205 316 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 P2RY12Q9H244 342 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 RABEP2Q9H5N1 569 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 WDR26Q9H7D7 661 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 GALPQ9UBC7 116 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 ZNF180Q9UJW8 692 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 SLC39A10Q9ULF5 831 aa27.15■■□□□ 1.94
SMARCD3-201ENST00000262188 FAM95CA0A1B0GW59 222 aa27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 ZSCAN9O15535 394 aaPredicted RBP27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 NIPSNAP2O75323 286 aa27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 NR1D1P20393 614 aa27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 SPRP35270 261 aaPredicted RBP27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 CDKN2DP55273 166 aa27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 DYNC1I2Q13409 638 aaKnown RBP27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 PIM3Q86V86 326 aa27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 RBFAQ8N0V3 343 aa27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 BEND7Q8N7W2 519 aaPredicted RBP27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 LKAAEAR1Q8TD35 194 aa27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 MZB1Q8WU39 189 aa27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 ASB12Q8WXK4 309 aa27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 SLC6A18Q96N87 628 aa27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 OLFM1Q99784 485 aa27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 CEP192Q8TEP8 1941 aa27.14■■□□□ 1.94
SMARCD3-201ENST00000262188 IGLV3-16A0A075B6K0 115 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 OR2AG2A6NM03 316 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 ANP32DO95626 131 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 TRIM23P36406 574 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 CTSCP53634 463 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 PPARDQ03181 441 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 NAPRTQ6XQN6 538 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 KIRREL3Q8IZU9 778 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 RASGEF1AQ8N9B8 481 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 TMEM145Q8NBT3 493 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 COX14Q96I36 57 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 APOOQ9BUR5 198 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 TEX101Q9BY14 249 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 TMBIM4Q9HC24 238 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 ATXN10Q9UBB4 475 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 PRKAB1Q9Y478 270 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 CCDC163A0A0D9SF12 145 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 A0A1W2PPC4 97 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 GOLGA8RI6L899 631 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 HRO43593 1189 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 ASMTLO95671 621 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 MYZAPP0CAP1 466 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 AKT2P31751 481 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 TIAL1Q01085 375 aaKnown RBP eCLIP27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 TMEM115Q12893 351 aaPredicted RBP27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 ANGPT1Q15389 498 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 ADGRG6Q86SQ4 1221 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 CLPBQ9H078 707 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 MIR1-1HGQ9H1L0 117 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 KCTD5Q9NXV2 234 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 LGALS13Q9UHV8 139 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 BLOC1S6Q9UL45 172 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 MED16Q9Y2X0 877 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 KMT2EQ8IZD2 1858 aa27.13■■□□□ 1.93
SMARCD3-201ENST00000262188 MEI4A8MW99 385 aa27.12■■□□□ 1.93
SMARCD3-201ENST00000262188 PRMT5O14744 637 aaPredicted RBP27.12■■□□□ 1.93
SMARCD3-201ENST00000262188 FPGTO14772 594 aa27.12■■□□□ 1.93
SMARCD3-201ENST00000262188 SCAMP1O15126 338 aa27.12■■□□□ 1.93
SMARCD3-201ENST00000262188 RGS16O15492 202 aaPredicted RBP27.12■■□□□ 1.93
SMARCD3-201ENST00000262188 ZNF7P17097 686 aaPredicted RBP27.12■■□□□ 1.93
SMARCD3-201ENST00000262188 MSH3P20585 1137 aa27.12■■□□□ 1.93
SMARCD3-201ENST00000262188 LRRC23Q53EV4 343 aaPredicted RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms