RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 A0A1W2PP18 115 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 H0Y858 1186 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 KCNK1O00180 336 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CLDN5O00501 218 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 MATN3O15232 486 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 IRAK2O43187 625 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 DLX3O60479 287 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PDE9AO76083 593 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 OR6B1O95007 311 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ITGB1P05556 798 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ENO2P09104 434 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CCDC159P0C7I6 412 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 MBL2P11226 248 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 MTHFD2P13995 350 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 LEPRP48357 1165 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 INPP1P49441 399 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 HNRNPFP52597 415 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 MLLT1Q03111 559 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 LRRC74AQ0VAA2 488 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CBX2Q14781 532 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PLEKHG6Q3KR16 790 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FBXO43Q4G163 708 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SPANXN2Q5MJ10 180 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 MARC1Q5VT66 337 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 AFTPHQ6ULP2 937 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 RHEBL1Q8TAI7 183 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 HDAC10Q969S8 669 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TAMM41Q96BW9 452 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 L3HYPDHQ96EM0 354 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 MYRFLQ96LU7 910 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 NODALQ96S42 347 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 OSMRQ99650 979 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ACBD6Q9BR61 282 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 NDEL1Q9GZM8 345 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TLR9Q9NR96 1032 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CD274Q9NZQ7 290 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PHF11Q9UIL8 331 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SAMD4AQ9UPU9 718 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PLXND1Q9Y4D7 1925 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ZNF99A8MXY4 864 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 G3V2T6 193 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 STX16-NPEPL1H3BU86 382 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FXYD1O00168 92 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FBP2O00757 339 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 STX16O14662 325 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 RAD51BO15315 384 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TPST1O60507 370 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TSPAN12O95859 305 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FGF4P08620 206 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 C4BPBP20851 252 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 AKAP5P24588 427 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 RPL9P32969 192 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 KCNC1P48547 511 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 LRP8Q14114 963 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TIGD5Q53EQ6 642 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 INO80DQ53TQ3 878 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 HECTD2Q5U5R9 776 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 GALNT18Q6P9A2 607 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 GPR155Q7Z3F1 870 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TAC4Q86UU9 113 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 HID1Q8IV36 788 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FAM126BQ8IXS8 530 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CARNMT1Q8N4J0 409 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 C9orf43Q8TAL5 461 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SKA2Q8WVK7 121 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 NXNL1Q96CM4 212 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FAM120BQ96EK7 910 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 DNAJC1Q96KC8 554 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 C19orf43Q9BQ61 176 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TEX12Q9BXU0 123 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 MAGIXQ9H6Y5 334 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CYP4F12Q9HCS2 524 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SCUBE2Q9NQ36 999 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 DYRK4Q9NR20 520 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PCDHGB4Q9UN71 923 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ERGIC3Q9Y282 383 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PCDHGB5Q9Y5G0 923 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TAF4O00268 1085 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 BNIP3LO60238 219 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SYNCRIPO60506 623 aaKnown RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 NDUFS2O75306 463 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 LRIG2O94898 1065 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 DLGAP3O95886 979 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 LINC00271P0C7V0 271 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 HGFP14210 728 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CD40LGP29965 261 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 SLC5A2P31639 672 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ENTPD1P49961 510 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 FCGRTP55899 365 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ERVK-8P63133 956 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 LIPEQ05469 1076 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 POU6F1Q14863 301 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 LYPLAL1Q5VWZ2 237 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 GDF6Q6KF10 455 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PLEKHH3Q7Z736 793 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 ADAMTSL2Q86TH1 951 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 CCDC103Q8IW40 242 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PARP8Q8N3A8 854 aa4.1□□□□□ -1.75
UBE4A-201ENST00000252108 PTGR2Q8N8N7 351 aaPredicted RBP4.1□□□□□ -1.75
UBE4A-201ENST00000252108 TWIST2Q8WVJ9 160 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms