RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 LINGO3P0C6S8 592 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 SRCP12931 536 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 CSNK1DP48730 415 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 YBX1P67809 324 aaKnown RBP21.41■■□□□ 1.02
CLN6-201ENST00000249806 CHRNA6Q15825 494 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 HACD2Q6Y1H2 254 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 FRA10AC1Q70Z53 315 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 DLG3Q92796 817 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 TEX37Q96LM6 180 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 NOL11Q9H8H0 719 aaKnown RBP21.41■■□□□ 1.02
CLN6-201ENST00000249806 EPS15L1Q9UBC2 864 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 DTNAQ9Y4J8 743 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 GPR45Q9Y5Y3 372 aa21.41■■□□□ 1.02
CLN6-201ENST00000249806 GLYATL1P3A0A0U1RQE8 302 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 PRSS51A0A1B0GVH4 220 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 NPIPB15A6NHN6 443 aaPredicted RBP21.4■■□□□ 1.02
CLN6-201ENST00000249806 GIPC1O14908 333 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 SOCS5O75159 536 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 LYNP07948 512 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 LINC00271P0C7V0 271 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 UQCRBP14927 111 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 ERVPABLB-1P60509 514 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 ADGRE1Q14246 886 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 IL23RQ5VWK5 629 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 CYP2R1Q6VVX0 501 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 RBFAQ8N0V3 343 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 PCYOX1LQ8NBM8 494 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 RIN3Q8TB24 985 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 GCNAQ96QF7 691 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 CDH23Q9H251 3354 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 GUCA1CO95843 209 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 CYBBP04839 570 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 PRR35P0CG20 571 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 VCLP18206 1134 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 ITGALP20701 1170 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 ACRV1P26436 265 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 ARL1P40616 181 aaPredicted RBP21.4■■□□□ 1.02
CLN6-201ENST00000249806 XKR7Q5GH72 579 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 LETMD1Q6P1Q0 360 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 ROPN1LQ96C74 230 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 VCXQ9H320 206 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 MRPL40Q9NQ50 206 aaKnown RBP21.4■■□□□ 1.02
CLN6-201ENST00000249806 GEMIN8Q9NWZ8 242 aaKnown RBP21.4■■□□□ 1.02
CLN6-201ENST00000249806 APPL1Q9UKG1 709 aa21.4■■□□□ 1.02
CLN6-201ENST00000249806 VPS4BO75351 444 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 RNASEH2AO75792 299 aaKnown RBP21.39■■□□□ 1.01
CLN6-201ENST00000249806 MATN4O95460 622 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 CHEK2O96017 543 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 IDO1P14902 403 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 SERPINA4P29622 427 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 MAPK8P45983 427 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 CREMQ03060 361 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 C6orf10Q5SRN2 563 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 TMEM25Q86YD3 366 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 ICA1LQ8NDH6 482 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 GPR26Q8NDV2 337 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 LMLNQ96KR4 655 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 TUBGCP5Q96RT8 1024 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 C1orf50Q9BV19 199 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 NUSAP1Q9BXS6 441 aaKnown RBP21.39■■□□□ 1.01
CLN6-201ENST00000249806 ABCG8Q9H221 673 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 SLC52A3Q9NQ40 469 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 NUDT4Q9NZJ9 180 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 CRLS1Q9UJA2 301 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 GNPTGQ9UJJ9 305 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 ZBBXA8MT70 800 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 BBIP1A8MTZ0 92 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 ANGPT2O15123 496 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 RPS3P23396 243 aaKnown RBP eCLIP21.39■■□□□ 1.01
CLN6-201ENST00000249806 NAA20P61599 178 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 CAPRIN1Q14444 709 aaKnown RBP21.39■■□□□ 1.01
CLN6-201ENST00000249806 SAMD4BQ5PRF9 694 aaKnown RBP21.39■■□□□ 1.01
CLN6-201ENST00000249806 ASTLQ6HA08 431 aaPredicted RBP21.39■■□□□ 1.01
CLN6-201ENST00000249806 OR52E8Q6IFG1 317 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 OGFOD2Q6N063 350 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 CRTC1Q6UUV9 634 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 CCDC149Q6ZUS6 474 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 ADAMTSL2Q86TH1 951 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 GPR65Q8IYL9 337 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 ELMOD1Q8N336 334 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 TCEAL4Q96EI5 215 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 DCUN1D1Q96GG9 259 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 HBEGFQ99075 208 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 GPATCH1Q9BRR8 931 aaKnown RBP21.39■■□□□ 1.01
CLN6-201ENST00000249806 NSUN3Q9H649 340 aaKnown RBP21.39■■□□□ 1.01
CLN6-201ENST00000249806 ASAH2Q9NR71 780 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 NDUFAF1Q9Y375 327 aa21.39■■□□□ 1.01
CLN6-201ENST00000249806 CHD7Q9P2D1 2997 aa21.38■■□□□ 1.01
CLN6-201ENST00000249806 TRBV5-4A0A0C4DH59 114 aa21.38■■□□□ 1.01
CLN6-201ENST00000249806 FFAR2O15552 330 aa21.38■■□□□ 1.01
CLN6-201ENST00000249806 CHRM1P11229 460 aaPredicted RBP21.38■■□□□ 1.01
CLN6-201ENST00000249806 MED21Q13503 144 aa21.38■■□□□ 1.01
CLN6-201ENST00000249806 FUT11Q495W5 492 aa21.38■■□□□ 1.01
CLN6-201ENST00000249806 BLOC1S3Q6QNY0 202 aa21.38■■□□□ 1.01
CLN6-201ENST00000249806 ZNF382Q96SR6 550 aa21.38■■□□□ 1.01
CLN6-201ENST00000249806 TMCO1Q9UM00 188 aa21.38■■□□□ 1.01
CLN6-201ENST00000249806 ADH1AP07327 375 aa21.37■■□□□ 1.01
CLN6-201ENST00000249806 ERVFC1P60507 584 aa21.37■■□□□ 1.01
CLN6-201ENST00000249806 SNRPD1P62314 119 aaKnown RBP21.37■■□□□ 1.01
CLN6-201ENST00000249806 FOLH1Q04609 750 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms