RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PLLPQ9Y342 182 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 MYLKQ15746 1914 aa12.78□□□□□ -0.36
LSM8-201ENST00000249299 SCN8AQ9UQD0 1980 aa12.77□□□□□ -0.36
LSM8-201ENST00000249299 NCOR1O75376 2440 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 C17orf113A0A1B0GUU1 675 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 TMEM120BA0PK00 339 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 GPR39O43194 453 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 KLHL2O95198 593 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 MYCLP1P12525 358 aaPredicted RBP12.77□□□□□ -0.37
LSM8-201ENST00000249299 ENO3P13929 434 aaPredicted RBP12.77□□□□□ -0.37
LSM8-201ENST00000249299 ZNF37AP17032 561 aaPredicted RBP12.77□□□□□ -0.37
LSM8-201ENST00000249299 CHRM3P20309 590 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 CA5AP35218 305 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 MAPK9P45984 424 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 PRLHRP49683 370 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 RGS4P49798 205 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 CLCN7P51798 805 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 CDKN2DP55273 166 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 KIAA1024LP59773 190 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 ATP6V0D1P61421 351 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 TIAL1Q01085 375 aaKnown RBP eCLIP12.77□□□□□ -0.37
LSM8-201ENST00000249299 OVGP1Q12889 678 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 GTF2H3Q13889 308 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 CCDC153Q494R4 210 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 KLC3Q6P597 504 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 FAM124AQ86V42 546 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 SLC41A1Q8IVJ1 513 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 TMEM145Q8NBT3 493 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 INPP5DQ92835 1189 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 FOXJ1Q92949 421 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 SCARF2Q96GP6 870 aaPredicted RBP12.77□□□□□ -0.37
LSM8-201ENST00000249299 NECAB3Q96P71 396 aaPredicted RBP12.77□□□□□ -0.37
LSM8-201ENST00000249299 OLFM1Q99784 485 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 BOCQ9BWV1 1114 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 TRMT6Q9UJA5 497 aaKnown RBP12.77□□□□□ -0.37
LSM8-201ENST00000249299 CYP8B1Q9UNU6 501 aa12.77□□□□□ -0.37
LSM8-201ENST00000249299 TRIOO75962 3097 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 METTL12A8MUP2 240 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 K7ESM1 405 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 CACNB4O00305 520 aaPredicted RBP12.76□□□□□ -0.37
LSM8-201ENST00000249299 TNFRSF10CO14798 259 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 CHUKO15111 745 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 PLXNA2O75051 1894 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 NDUFS2O75306 463 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 CDK14O94921 469 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 PCCBP05166 539 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 IGHV4-34P06331 123 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 LTA4HP09960 611 aaKnown RBP12.76□□□□□ -0.37
LSM8-201ENST00000249299 DGKAP23743 735 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 IL2P60568 153 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 PFN3P60673 137 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 PPP2CBP62714 309 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 PPP2CAP67775 309 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 INPP5AQ14642 412 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 PLEKHS1Q5SXH7 462 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 ABI3BPQ7Z7G0 1075 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 CMC1Q7Z7K0 106 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 ADGRG6Q86SQ4 1221 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 IQCHQ86VS3 1027 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 WDR5BQ86VZ2 330 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 HEATR4Q86WZ0 1026 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 DCP2Q8IU60 420 aaKnown RBP12.76□□□□□ -0.37
LSM8-201ENST00000249299 CEP97Q8IW35 865 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 C4orf33Q8N1A6 199 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 CLDN19Q8N6F1 224 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 ACVR1CQ8NER5 493 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 RDH11Q8TC12 318 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 CD200R1Q8TD46 325 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 DENND1AQ8TEH3 1009 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 ASZ1Q8WWH4 475 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 NDNQ99608 321 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 DERL2Q9GZP9 239 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 VPS11Q9H270 941 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 NMRAL1Q9HBL8 299 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 MBNL1Q9NR56 388 aaKnown RBP12.76□□□□□ -0.37
LSM8-201ENST00000249299 SPATA6Q9NWH7 488 aaPredicted RBP12.76□□□□□ -0.37
LSM8-201ENST00000249299 FBXO4Q9UKT5 387 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 SLC17A4Q9Y2C5 497 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.76□□□□□ -0.37
LSM8-201ENST00000249299 BPTFQ12830 3046 aa12.76□□□□□ -0.37
LSM8-201ENST00000249299 BDP1A6H8Y1 2624 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 A0A1W2PPC4 97 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 SLC31A1O15431 190 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 LAMTOR5O43504 91 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 SGTAO43765 313 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 NUAK1O60285 661 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 RBP1P09455 135 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 CD27P26842 260 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 AOAHP28039 575 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 HTR1BP28222 390 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 HPDP32754 393 aaPredicted RBP12.75□□□□□ -0.37
LSM8-201ENST00000249299 IGFALSP35858 605 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 ABCG1P45844 678 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 RABIFP47224 123 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 GBX1Q14549 363 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 ACAP2Q15057 778 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 SEPT7Q16181 437 aaKnown RBP12.75□□□□□ -0.37
LSM8-201ENST00000249299 NEK10Q6ZWH5 1172 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 OTOAQ7RTW8 1153 aa12.75□□□□□ -0.37
LSM8-201ENST00000249299 C1orf210Q8IVY1 113 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms