RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 C6orf203Q9P0P8 240 aaPredicted RBP15.58■□□□□ 0.09
LRFN1-201ENST00000248668 MAP10Q9P2G4 905 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 ZMYM5Q9UJ78 669 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 SNX13Q9Y5W8 968 aa15.58■□□□□ 0.09
LRFN1-201ENST00000248668 RPS17P08708 135 aaKnown RBP15.58■□□□□ 0.08
LRFN1-201ENST00000248668 GRIA3P42263 894 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 C6orf52Q5T4I8 152 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 APLFQ8IW19 511 aaPredicted RBP15.58■□□□□ 0.08
LRFN1-201ENST00000248668 DNAJB14Q8TBM8 379 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 PIH1D2Q8WWB5 315 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 PPWD1Q96BP3 646 aaKnown RBP15.58■□□□□ 0.08
LRFN1-201ENST00000248668 SPATA16Q9BXB7 569 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 CLPBQ9H078 707 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 PRMT5O14744 637 aaPredicted RBP15.58■□□□□ 0.08
LRFN1-201ENST00000248668 TGM5O43548 720 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 PENKP01210 267 aaPredicted RBP15.58■□□□□ 0.08
LRFN1-201ENST00000248668 FGF4P08620 206 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 HTR6P50406 440 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 ARHGEF6Q15052 776 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 PDK3Q15120 406 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 RFLNAQ6ZTI6 216 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 ZSWIM9Q86XI8 627 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
LRFN1-201ENST00000248668 SLC22A17Q8WUG5 538 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 NMD3Q96D46 503 aaKnown RBP15.58■□□□□ 0.08
LRFN1-201ENST00000248668 CORO1BQ9BR76 489 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 C2orf49Q9BVC5 232 aaPredicted RBP15.58■□□□□ 0.08
LRFN1-201ENST00000248668 VCX3AQ9NNX9 186 aa15.58■□□□□ 0.08
LRFN1-201ENST00000248668 CEP290O15078 2479 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 CASQ2O14958 399 aaPredicted RBP15.57■□□□□ 0.08
LRFN1-201ENST00000248668 HNF1BP35680 557 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 UFM1P61960 85 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 CACNG1Q06432 222 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 AAK1Q2M2I8 961 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 ANKRD33Q7Z3H0 272 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 STON2Q8WXE9 905 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 MRPS31Q92665 395 aaKnown RBP15.57■□□□□ 0.08
LRFN1-201ENST00000248668 DTNBP1Q96EV8 351 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 HIC2Q96JB3 615 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 NSUN3Q9H649 340 aaKnown RBP15.57■□□□□ 0.08
LRFN1-201ENST00000248668 OGDHLQ9ULD0 1010 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 NME4O00746 187 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 TRIM24O15164 1050 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 FZD6O60353 706 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 HMGCLP35914 325 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 PTGER3P43115 390 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 CLCN7P51798 805 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 GSTA3Q16772 222 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 INO80DQ53TQ3 878 aaPredicted RBP15.57■□□□□ 0.08
LRFN1-201ENST00000248668 DGKKQ5KSL6 1271 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 C6orf10Q5SRN2 563 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 LETMD1Q6P1Q0 360 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 MBOAT1Q6ZNC8 495 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 GPRIN3Q6ZVF9 776 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 DCAF4L2Q8NA75 395 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 KCNJ9Q92806 393 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 EME1Q96AY2 570 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 NR1H4Q96RI1 486 aaPredicted RBP15.57■□□□□ 0.08
LRFN1-201ENST00000248668 IL26Q9NPH9 171 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 HCFC1R1Q9NWW0 138 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 SLAMF8Q9P0V8 285 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 BCAP29Q9UHQ4 241 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 APPL1Q9UKG1 709 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 AURKCQ9UQB9 309 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 VPS9D1Q9Y2B5 631 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 AP4S1Q9Y587 144 aa15.57■□□□□ 0.08
LRFN1-201ENST00000248668 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.56■□□□□ 0.08
LRFN1-201ENST00000248668 TIPRLO75663 272 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 SLC25A14O95258 325 aaPredicted RBP15.56■□□□□ 0.08
LRFN1-201ENST00000248668 HSPA7P48741 367 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 ERVPABLB-1P60509 514 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 RETSATQ6NUM9 610 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 FNDC5Q8NAU1 212 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 ASB2Q96Q27 587 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 EGFL8Q99944 293 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 ABCB8Q9NUT2 735 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 CRLS1Q9UJA2 301 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 LSM7Q9UK45 103 aaKnown RBP15.56■□□□□ 0.08
LRFN1-201ENST00000248668 INTS6Q9UL03 887 aaKnown RBP15.56■□□□□ 0.08
LRFN1-201ENST00000248668 CCL26Q9Y258 94 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 NDUFAF1Q9Y375 327 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 V9GYQ6 96 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 PIKFYVEQ9Y2I7 2098 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 E2F3O00716 465 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 CCL16O15467 120 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 ESR1P03372 595 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 CHRNA6Q15825 494 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 TIGD2Q4W5G0 525 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 RABL3Q5HYI8 236 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 AARS2Q5JTZ9 985 aaKnown RBP15.56■□□□□ 0.08
LRFN1-201ENST00000248668 ZFP1Q6P2D0 407 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 TCEAL8Q8IYN2 117 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 FIBCD1Q8N539 461 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 PCYOX1LQ8NBM8 494 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 OR56A4Q8NGH8 313 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 PRSS51A0A1B0GVH4 220 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 FFAR3O14843 346 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 GPR42O15529 346 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 OR6B1O95007 311 aa15.56■□□□□ 0.08
LRFN1-201ENST00000248668 ESRRBO95718 433 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms