RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 UTS2RQ9UKP6 389 aa9.05□□□□□ -0.96
SYDE2-201ENST00000234668 PRSS21Q9Y6M0 314 aa9.05□□□□□ -0.96
SYDE2-201ENST00000234668 SCN4AP35499 1836 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 A0A1W2PQ45 241 aaPredicted RBP9.04□□□□□ -0.96
SYDE2-201ENST00000234668 A0A1W2PQY0 241 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 OR6C75A6NL08 312 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 KDELR3O43731 214 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 SNAP29O95721 258 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 B3GALT4O96024 378 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 EPOP01588 193 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 F11P03951 625 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 OGNP20774 298 aaKnown RBP9.04□□□□□ -0.96
SYDE2-201ENST00000234668 PSMA4P25789 261 aaKnown RBP9.04□□□□□ -0.96
SYDE2-201ENST00000234668 ZFP36L2P47974 494 aaKnown RBP9.04□□□□□ -0.96
SYDE2-201ENST00000234668 PSMD8P48556 350 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 SUOXP51687 545 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 POLR2JP52435 117 aaKnown RBP9.04□□□□□ -0.96
SYDE2-201ENST00000234668 ZXDBP98169 803 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 PTGR1Q14914 329 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 NR6A1Q15406 480 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 TAF1AQ15573 450 aaPredicted RBP9.04□□□□□ -0.96
SYDE2-201ENST00000234668 FAM26DQ5JW98 314 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 HECTD3Q5T447 861 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 TTC33Q6PID6 262 aaPredicted RBP9.04□□□□□ -0.96
SYDE2-201ENST00000234668 B3GNT6Q6ZMB0 384 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 FRA10AC1Q70Z53 315 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 LRRC8DQ7L1W4 858 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 FIBCD1Q8N539 461 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 RHEBL1Q8TAI7 183 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 PROKR1Q8TCW9 393 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 CD99L2Q8TCZ2 262 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 RMND5BQ96G75 393 aaPredicted RBP9.04□□□□□ -0.96
SYDE2-201ENST00000234668 CIPCQ9C0C6 399 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 RBM38Q9H0Z9 239 aaKnown RBP9.04□□□□□ -0.96
SYDE2-201ENST00000234668 TMEM161AQ9NX61 479 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 CLEC4EQ9ULY5 219 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 MYRFQ9Y2G1 1151 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 PCDHA9Q9Y5H5 950 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 CEPT1Q9Y6K0 416 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 A0A1W2PP18 115 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 A0A1W2PQ67 120 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 E2F3O00716 465 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 ESRRBO95718 433 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 IDO1P14902 403 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 ZNF23P17027 643 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 GJA1P17302 382 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 CR2P20023 1033 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 FASP25445 335 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 SLC26A3P40879 764 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 CDH4P55283 916 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 RHOAP61586 193 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 LAPTM5Q13571 262 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 APOFQ13790 326 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 ABRAXAS2Q15018 415 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 RFLNAQ6ZTI6 216 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 TPGS1Q6ZTW0 290 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 APCDD1Q8J025 514 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 OR4F6Q8NGB9 312 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 ROPN1LQ96C74 230 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 EGFL8Q99944 293 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 HOPXQ9BPY8 73 aaPredicted RBP9.04□□□□□ -0.96
SYDE2-201ENST00000234668 OSBPL11Q9BXB4 747 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 GID8Q9NWU2 228 aa9.04□□□□□ -0.96
SYDE2-201ENST00000234668 POLR3HQ9Y535 204 aaPredicted RBP9.04□□□□□ -0.96
SYDE2-201ENST00000234668 H3BNH8 94 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 PQBP1O60828 265 aaKnown RBP9.03□□□□□ -0.96
SYDE2-201ENST00000234668 CLDN7O95471 211 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 PYGLP06737 847 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 RPS17P08708 135 aaKnown RBP9.03□□□□□ -0.96
SYDE2-201ENST00000234668 SLC2A4P14672 509 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 CDH2P19022 906 aaPredicted RBP9.03□□□□□ -0.96
SYDE2-201ENST00000234668 NFKBIAP25963 317 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 MAP7Q14244 749 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 SPOUT1Q5T280 376 aaKnown RBP9.03□□□□□ -0.96
SYDE2-201ENST00000234668 TXNDC8Q6A555 127 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 PTRHD1Q6GMV3 140 aaKnown RBP9.03□□□□□ -0.96
SYDE2-201ENST00000234668 CXorf57Q6NSI4 855 aaKnown RBP9.03□□□□□ -0.96
SYDE2-201ENST00000234668 PPP4R4Q6NUP7 873 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 HS3ST5Q8IZT8 346 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 FAM86B1Q8N7N1 296 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 TFAP2CQ92754 450 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 BIRC7Q96CA5 298 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 MRPL40Q9NQ50 206 aaKnown RBP9.03□□□□□ -0.96
SYDE2-201ENST00000234668 FNIP2Q9P278 1114 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 EBF1Q9UH73 591 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 CIDEBQ9UHD4 219 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 CDC14AQ9UNH5 594 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 XIRP2A4UGR9 3374 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 TMEM189-UBE2V1I3L0A0 370 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 CHEK2O96017 543 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 CAPNS1P04632 268 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 ZDHHC11BP0C7U3 371 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 STT3AP46977 705 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 NR1H2P55055 460 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 SMAD3P84022 425 aaKnown RBP9.03□□□□□ -0.96
SYDE2-201ENST00000234668 CTBSQ01459 385 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 RING1Q06587 406 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 LAMB3Q13751 1172 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 INPP5AQ14642 412 aa9.03□□□□□ -0.96
SYDE2-201ENST00000234668 PHKG1Q16816 387 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms