RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 LRRC39Q96DD0 335 aa5.66□□□□□ -1.5
RFX4-201ENST00000229387 CMTM5Q96DZ9 223 aa5.66□□□□□ -1.5
RFX4-201ENST00000229387 HSFY1Q96LI6 401 aa5.66□□□□□ -1.5
RFX4-201ENST00000229387 KLHL32Q96NJ5 620 aa5.66□□□□□ -1.5
RFX4-201ENST00000229387 GAS2L1Q99501 681 aaPredicted RBP5.66□□□□□ -1.5
RFX4-201ENST00000229387 NTPCRQ9BSD7 190 aaKnown RBP5.66□□□□□ -1.5
RFX4-201ENST00000229387 GPR88Q9GZN0 384 aa5.66□□□□□ -1.5
RFX4-201ENST00000229387 TMEM117Q9H0C3 514 aa5.66□□□□□ -1.5
RFX4-201ENST00000229387 RANBP3Q9H6Z4 567 aaPredicted RBP5.66□□□□□ -1.5
RFX4-201ENST00000229387 NIPAL2Q9H841 368 aa5.66□□□□□ -1.5
RFX4-201ENST00000229387 CD320Q9NPF0 282 aa5.66□□□□□ -1.5
RFX4-201ENST00000229387 GSN-AS1Q9NRJ2 163 aa5.66□□□□□ -1.5
RFX4-201ENST00000229387 SNX15Q9NRS6 342 aa5.66□□□□□ -1.5
RFX4-201ENST00000229387 TRHDEQ9UKU6 1024 aa5.66□□□□□ -1.5
RFX4-201ENST00000229387 TANC1Q9C0D5 1861 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 MAST2Q6P0Q8 1798 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 A8MVJ9 347 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 I3L521 148 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 GABRDO14764 452 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 HTRA2O43464 458 aaPredicted RBP5.65□□□□□ -1.5
RFX4-201ENST00000229387 TGM6O95932 706 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 DHFRP00374 187 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 COL11A2P13942 1736 aaPredicted RBP5.65□□□□□ -1.5
RFX4-201ENST00000229387 HK1P19367 917 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 ID4P47928 161 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 ROR1Q01973 937 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 SLC13A2Q13183 592 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 PCBP1Q15365 356 aaKnown RBP eCLIP5.65□□□□□ -1.5
RFX4-201ENST00000229387 AANATQ16613 207 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 DGUOKQ16854 277 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 SETMARQ53H47 684 aaPredicted RBP5.65□□□□□ -1.5
RFX4-201ENST00000229387 TREML2Q5T2D2 321 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 PYHIN1Q6K0P9 492 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 MAMDC4Q6UXC1 1216 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 PRSS48Q7RTY5 328 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 ERO1BQ86YB8 467 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 FAM47BQ8NA70 645 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 POC5Q8NA72 575 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 DUS3LQ96G46 650 aaKnown RBP5.65□□□□□ -1.5
RFX4-201ENST00000229387 MSANTD3Q96H12 275 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 PWWP2AQ96N64 755 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 CLUHP3Q96NS8 147 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 CDK5RAP2Q96SN8 1893 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 UHRF1Q96T88 793 aaPredicted RBP5.65□□□□□ -1.5
RFX4-201ENST00000229387 ZNF251Q9BRH9 671 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 BDH2Q9BUT1 245 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 NTMT1Q9BV86 223 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 BCO2Q9BYV7 579 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 COPS7BQ9H9Q2 264 aaPredicted RBP5.65□□□□□ -1.5
RFX4-201ENST00000229387 CAB39LQ9H9S4 337 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 POLE4Q9NR33 117 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 PXMP2Q9NR77 195 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 PAK1IP1Q9NWT1 392 aaPredicted RBP5.65□□□□□ -1.5
RFX4-201ENST00000229387 TMPRSS11EQ9UL52 423 aa5.65□□□□□ -1.5
RFX4-201ENST00000229387 NCANO14594 1321 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 A0A0B4J269 797 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 A0A1B0GVM2 712 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 ADM5C9JUS6 153 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 PHGDHO43175 533 aaKnown RBP5.65□□□□□ -1.51
RFX4-201ENST00000229387 MYL4P12829 197 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 ZNF250P15622 560 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 SPNP16150 400 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 CD58P19256 250 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 GLDCP23378 1020 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 EPHX2P34913 555 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 GSTM5P46439 218 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 RPS5P46782 204 aaKnown RBP5.65□□□□□ -1.51
RFX4-201ENST00000229387 EPHA4P54764 986 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 RAB4BP61018 213 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 ERVK-8P63133 956 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 CCNA1P78396 465 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 RBP5P82980 135 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 PDK2Q15119 407 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 ARSIQ5FYB1 569 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 PITRM1Q5JRX3 1037 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 C1orf220Q5T0J3 134 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 KANK2Q63ZY3 851 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 ZNF782Q6ZMW2 699 aaPredicted RBP5.65□□□□□ -1.51
RFX4-201ENST00000229387 CFAP77Q6ZQR2 320 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 LINC00523Q86TU6 105 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 SLC22A9Q8IVM8 553 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 PHC2Q8IXK0 858 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 CLEC4FQ8N1N0 589 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 ARFGAP1Q8N6T3 406 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 UBL4BQ8N7F7 174 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 FAM71DQ8N9W8 422 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 SLC37A3Q8NCC5 494 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 OR2T34Q8NGX1 318 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 C1orf54Q8WWF1 131 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 DEDD2Q8WXF8 326 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 ATG4AQ8WYN0 398 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 KREMEN1Q96MU8 473 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 TTYH2Q9BSA4 534 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 RACGAP1Q9H0H5 632 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 SAV1Q9H4B6 383 aaPredicted RBP5.65□□□□□ -1.51
RFX4-201ENST00000229387 CATSPERBQ9H7T0 1116 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 COQ10BQ9H8M1 238 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 COG4Q9H9E3 785 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 ZFP14Q9HCL3 533 aa5.65□□□□□ -1.51
RFX4-201ENST00000229387 DUS2Q9NX74 493 aaKnown RBP5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms