RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 LRRC8BQ6P9F7 803 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 IYDQ6PHW0 289 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 UNQ6494/PRO21346Q6UXR6 183 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 SYT10Q6XYQ8 523 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 SPRED1Q7Z699 444 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 SERPINA9Q86WD7 417 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 CCNJLQ8IV13 435 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 KLHL7Q8IXQ5 586 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 SFRP1Q8N474 314 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 DCBLD1Q8N8Z6 715 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 PPHLN1Q8NEY8 458 aaKnown RBP12.48□□□□□ -0.41
LSM5-201ENST00000223084 OR6C4Q8NGE1 309 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 GRK7Q8WTQ7 553 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 ULK4Q96C45 1275 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 DCUN1D1Q96GG9 259 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 COPS8Q99627 209 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 TIMM29Q9BSF4 260 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 LRRN3Q9H3W5 708 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 SYBUQ9NX95 663 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 BFARQ9NZS9 450 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 ATXN7L1Q9ULK2 861 aaPredicted RBP12.48□□□□□ -0.41
LSM5-201ENST00000223084 PCDHB1Q9Y5F3 818 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 ZFHX4Q86UP3 3567 aa12.48□□□□□ -0.41
LSM5-201ENST00000223084 IGF2RP11717 2491 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 FAM208BQ5VWN6 2430 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 TRABD2BA6NFA1 517 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 PRR19A6NJB7 356 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 PDZK1P1A8MUH7 402 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 NTN3O00634 580 aaPredicted RBP12.47□□□□□ -0.41
LSM5-201ENST00000223084 B4GAT1O43505 415 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 CSO75390 466 aaKnown RBP12.47□□□□□ -0.41
LSM5-201ENST00000223084 F3P13726 295 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 ACRV1P26436 265 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 RPL10P27635 214 aaKnown RBP12.47□□□□□ -0.41
LSM5-201ENST00000223084 NMBRP28336 390 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 ALDH4A1P30038 563 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 CASQ1P31415 396 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 FOXN2P32314 431 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 PTGIRP43119 386 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 NPY2RP49146 381 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 DRG2P55039 364 aaKnown RBP12.47□□□□□ -0.41
LSM5-201ENST00000223084 ETF1P62495 437 aaKnown RBP12.47□□□□□ -0.41
LSM5-201ENST00000223084 CDK16Q00536 496 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 LAMB3Q13751 1172 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 SPIDRQ14159 915 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 NFE2L1Q14494 772 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 PPP1R7Q15435 360 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 DBN1Q16643 649 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 AMZ1Q400G9 498 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 GPR33Q49SQ1 333 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 PCID2Q5JVF3 399 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 CES3Q6UWW8 571 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 FAM83HQ6ZRV2 1179 aaPredicted RBP12.47□□□□□ -0.41
LSM5-201ENST00000223084 ZNF438Q7Z4V0 828 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 CAND1Q86VP6 1230 aaKnown RBP12.47□□□□□ -0.41
LSM5-201ENST00000223084 AMZ2Q86W34 360 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 MPP5Q8N3R9 675 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 OR6P1Q8NGX9 317 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 DEPDC7Q96QD5 511 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 IL22Q9GZX6 179 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 ZDHHC3Q9NYG2 299 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 FAM8A1Q9UBU6 413 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 WDR37Q9Y2I8 494 aa12.47□□□□□ -0.41
LSM5-201ENST00000223084 PRAMEF33A0A0G2JMD5 474 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 ATP1B2P14415 290 aaPredicted RBP12.46□□□□□ -0.41
LSM5-201ENST00000223084 BRAFP15056 766 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 PNLIPP16233 465 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 IDSP22304 550 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 PAFAH1B1P43034 410 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 HHEXQ03014 270 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 ACVR1Q04771 509 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 SEMA3AQ14563 771 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 ISXQ2M1V0 245 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 BCL7AQ4VC05 210 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 NKAIN2Q5VXU1 208 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 AFTPHQ6ULP2 937 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 RBM44Q6ZP01 1051 aaKnown RBP12.46□□□□□ -0.41
LSM5-201ENST00000223084 USP53Q70EK8 1073 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 NLRP9Q7RTR0 991 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 TMPRSS9Q7Z410 1059 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 B3GNT8Q7Z7M8 397 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 CACTIN-AS1Q8N1I8 211 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 LILRA3Q8N6C8 439 aaPredicted RBP12.46□□□□□ -0.41
LSM5-201ENST00000223084 GFM1Q96RP9 751 aaKnown RBP12.46□□□□□ -0.41
LSM5-201ENST00000223084 TRIM56Q9BRZ2 755 aaKnown RBP12.46□□□□□ -0.41
LSM5-201ENST00000223084 FOXP3Q9BZS1 431 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 ZNF624Q9P2J8 865 aaPredicted RBP12.46□□□□□ -0.41
LSM5-201ENST00000223084 ASIC3Q9UHC3 531 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 PCYOX1Q9UHG3 505 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 RIMKLBQ9ULI2 386 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 PSMD13Q9UNM6 376 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 PRSS21Q9Y6M0 314 aa12.46□□□□□ -0.41
LSM5-201ENST00000223084 FASNP49327 2511 aaKnown RBP12.46□□□□□ -0.42
LSM5-201ENST00000223084 USP24Q9UPU5 2620 aa12.45□□□□□ -0.42
LSM5-201ENST00000223084 IGLV3-16A0A075B6K0 115 aa12.45□□□□□ -0.42
LSM5-201ENST00000223084 MGAT4DA6NG13 374 aa12.45□□□□□ -0.42
LSM5-201ENST00000223084 OR52A4PA6NMU1 304 aa12.45□□□□□ -0.42
LSM5-201ENST00000223084 CFAP99D6REC4 459 aa12.45□□□□□ -0.42
LSM5-201ENST00000223084 AGRPO00253 132 aa12.45□□□□□ -0.42
LSM5-201ENST00000223084 TCEA3O75764 348 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms